Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1724 |
Symbol | |
ID | 3724433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2016748 |
End bp | 2018406 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637751328 |
Product | hypothetical protein |
Protein accession | YP_357137 |
Protein GI | 77919322 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0657943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TTCGCTCGGT TAAACTTCAT CGCCCCTCGT TCAGCGCAAC CTTCGTTGCG CTATCCGTCG CCCTGTTCAT TGTCGCGATG GATAACCGCC TCTTCTGGCG CTCGTTCACC TCCAGACTGG GACTGGATAC CTGGAGCCAC TGGGCCTTCG TGGCCTCCGT GGGACTGGTT CTGGTGCTTC TACTCAACAT CCTGATTTCT CTCTTCGCTT TCCGTCCGGT CTTCAAACCC TTCCTGGTGA TTCTGCTACT GACCACGGCT GCCATCAGCT ATTTCTCCGA CACCTTTGGC GTGGTTATCG ACAAATCGAT GATTCATAAT GTCTTTGAGA CCGACGTCAA CGAAGCCTTC GAACTTGTGA CCTGGTCACT GTTCAACCAT CTGCTGTGGT TTGGTGTCAT CCCGGCCGTT CTGGTTGTCC TGACGCGCAT CCGAACCCGC TCCTGTAAAA GAGAATTGCT GACCCGATGC GGGGTGATCC TCGGCAGTCT GGTCATTGTT CTGGGTCTTG GCATGACGCA TTATAAGCAG TTCGTCCTTT TCGGTCGCCA GAACCGGGAC CTTCGGATGT GCCTGAATCC TTCCTATTCG TTATATTCCC TGCAAAAAGT CATTCAAAAA AAATATTTCT CCCGGGACGA AGGACCATTG CGCGTGGTGG CGCCCGATGC GGTCAAAAGC CGAAACGGAT CCAAGACGGT CGTGGTTCTG GCGCTTGGTG AAACTGCCCG GGCCCGGGAA TTTTCTTTCA ACGGCTACCA ACGCGACACC AACCCGGAGC TTGCCGACCG GGATGTCGTT AATTTTTCCC AGGTCCAGGC ATGCGGTACC TCCACCGCCG AATCTCTGCC CTGCATATTT TCCTCGCTTG AGCGGGAGGC ATACAGCCGG GACAAAGCTG CCCGTCAGGA AAACCTGCTC GACATCCTCC AGCGGGTCGG GGTCACGGTC ATATGGCGGG ACAACAATTC GGGAAGTAAA GGAGTCGCCG ATCGCATCGC CTACGAGGAT CTGTCCCGGC AGTCCGACGC CGAGTTGTGC GAGGGCGGTA ACTGCTTCGA TGAAATCCTG CTGCACGATC TTGACCGGCG GCTTGCGGAA ACCGCGGGGG ACATGTTGAT CGTGCTGCAC ATGAAAGGAA GTCACGGTCC CTCGTATTAC AGGCGTACTC CGGCTGCCTT TAAGGTCTTT TTTCCCGAAT GTAGCCTGGA TAATATCCAA GAGTGCCCGC AGCAAACGAT CGTCAACGCC TACGACAATA CGATCGTTTA TACCGATCAT GTTTTGGCAA AACTTATCGA TCTACTGCGA TCTAAGAGTT TTCCTACGGC GATGCTTTAT GTCTCCGATC ACGGCGAATC GCTGGGAGAG GGAGGGGTAT ATCTGCATGG ACTGCCCTAC GCGTTGGCCC CCGCTGAGCA GAAGCAGATA CCCATGATGT TCTGGGCCTC GGAAAATTTC ATTAGCCGGA AATCCCTGGA TATCGATGCT CTTAAAGCCC ATAGTAAAAC ATCCTATAGC CATGACGTGA TATTCCACAG TATTTTCGGG TTGTTCGATA TCGATAGCGC AATCTATCGT CAAGACCTGG ATATCTTCTC CGCTTGCCGT CCCCCCGGGC GACCGTTCGA CAGAGGAAGG GCCGGATGA
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Protein sequence | MQIFRSVKLH RPSFSATFVA LSVALFIVAM DNRLFWRSFT SRLGLDTWSH WAFVASVGLV LVLLLNILIS LFAFRPVFKP FLVILLLTTA AISYFSDTFG VVIDKSMIHN VFETDVNEAF ELVTWSLFNH LLWFGVIPAV LVVLTRIRTR SCKRELLTRC GVILGSLVIV LGLGMTHYKQ FVLFGRQNRD LRMCLNPSYS LYSLQKVIQK KYFSRDEGPL RVVAPDAVKS RNGSKTVVVL ALGETARARE FSFNGYQRDT NPELADRDVV NFSQVQACGT STAESLPCIF SSLEREAYSR DKAARQENLL DILQRVGVTV IWRDNNSGSK GVADRIAYED LSRQSDAELC EGGNCFDEIL LHDLDRRLAE TAGDMLIVLH MKGSHGPSYY RRTPAAFKVF FPECSLDNIQ ECPQQTIVNA YDNTIVYTDH VLAKLIDLLR SKSFPTAMLY VSDHGESLGE GGVYLHGLPY ALAPAEQKQI PMMFWASENF ISRKSLDIDA LKAHSKTSYS HDVIFHSIFG LFDIDSAIYR QDLDIFSACR PPGRPFDRGR AG
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