| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1712 |
|---|
| Symbol | |
|---|
| ID | 3724421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1999088 |
|---|
| End bp | 2001391 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637751316 |
|---|
| Product | cation transporting P-type ATPase |
|---|
| Protein accession | YP_357125 |
|---|
| Protein GI | 77919310 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000183407 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC CAGTATGCGG TATGGATGTT ATTCCTGAAA AAGCTGCCGG AAAAACGGAA
CATCAAGGTA AGGATTATTA TTTCTGCTCC GTTAAATGTC TGGAAAAATT TAAACAAGAT
CCTGAAGAAT ATCTGGATAA AGCTAGGAAA GAAAAAAGAA AAGCAGCAAG CAAGGATGAT
CGGAGGGAAT ACACCTGTCC CATGCATCCG GAAGTGGAGC AGATCGGTCC GGGCAGCTGT
CCCAAGTGCG GCATGGATCT CGAACCCAAA GTTATCAGCC TCGAGGAGGA AGAGGATACC
TCCGAATTGA AGGGTTGGGT ACGCCGATTC TGGGTGGCGG CTGTCCTTTC TCTTCCCGTA
CTGCTGCTGG CCATGGGCGA ACTCATTCCT GGGATCGGTG GCTGGATTAA AAACCTGGCC
GATCCATATA CCCGGAACTG GATTGAATTA GCTCTGGCCA CGCCGGTAGT GTTGTGGTGC
GGATGGCCGA TCCTGGTGCG TTACTGGCAG TCGCTGGTGA ATCGCAGCAT GAATATGTTC
ACCCTTATCG GGCTGGGCGT CGGAGTGGCC TATCTTTACA GCATTGTGGC CACGCTTTGG
CCGGAGTTTT TTCCCATCTC CTTTCGTGGA CCGGAAGGGG AGGTGGCCGT GTACTTTGAA
GCGGCTGCCG TCATAACCAC CCTTGTATTG ATGGGACAGG TTATGGAGTC GCGTGCCCGC
AGTCAGACCG GTAAGGCGAT CCGAGCATTG TTAGGTCTGG CGGCCAAGAC CGCACGCCGC
ATTGACGATG ACGGCAATGA AGAGGATGTA CCCCTGGAAG CGGTCGAAGT CGGGGATCGG
TTGCGAGTAC GTCCTGGCGA AAAAGTACCT GTCGACGGTG TGGTCCTCGA AGGCACCAGT
AGCATAGACG AGTCCATGAT CAGTGGCGAG CCCCTGCCGG TGGGCAAGCA GCCCGGAGAA
CCGGTCACGG GAGCGACAGT GAATCAGACC GGCTCTATTA TCATGAAGGC CGAAAGAGTT
GGGGCCGATA CCCTGTTAAG CCAGATTGTG CAGATGGTTG CCGAAGCGCA GCGCAGCCGC
GCCCCCATCC AAAAACTGGC CGATATGGTG GCCGGTTATT TCGTGCCGAC GGTGGTGGCG
GTGGCCTTGA TCACTTTCGT TGTATGGTCC CTGGCCGGCC CCGAGCCGCG CATGGCCCAT
GCACTGATCA ATGCCGTGGC GGTGCTTATC ATCGCCTGCC CCTGTGCCCT CGGGTTGGCT
ACTCCCATGT CGATCATGGT GGCAACCGGT AAGGGAGCGA CTCTCGGCGT GCTGTTCAAG
AACGCCGAGG CCATCGAACA CCTGCGTAAG GTTGATACCC TGGTGGTGGA CAAGACCGGC
ACTCTTACCG AAGGCAAACC CAAACTGGTT GCCGTGGAGG CCACCGGCAT GGAGGATGAT
GAGCTGTTGC GCCTGGCGGC GAGCCTTGAG CGTGGCAGCG AGCATCCTCT GGCGGAGGCC
ATCGTACAAG GTGCGCAGGA CCGGAAGGTT GAATTGACCA AGGCTGACGA CTTCGAATCC
CTTACCGGTA AAGGGGTGAT CGGTCGGGTC GATGGGAAAG AGGTGGTTTT GGGCACGCAG
GCACTGCTGA AGGAAAGGAA CATCGATGCG GAAAACCTTT TGAGCAAGGC AGAAACTTTG
CGAAAAGAAG GTCAGACTGC GATGTTCATA GCGGTAAACG GCCAGCCTGC CGGTTTACTG
GCGGTAGCCG ATCCCATTAA AGAAACAACG CCCCAAGCCA TCAGGCAGTT GCATCAAAGC
GGCATCCGTA TCGTTATGCT TACCGGGGAT AATCTCACCA CGGCCAAAGC GGTAGCGGAT
CGATTGAATA TTGATGAGGT TCGGGCAGAG GTGCTGCCTC AGGACAAGGC GCTAAAAGTC
AAGGAATTGC AGGAAGACGG ACGTTTCGTC GCCATGGCCG GTGACGGTAT CAACGATGCT
CCGGCTCTGG CACAGGCCCA GGTCGGCATC GCCATGGGTA CCGGTACCGA CGTGGCCATG
GAAAGCGCCG ATGTGACTTT GGTCAAGGGC GACCTGCGCG GTATCGTCCG CGCCCGCTCA
TTGAGCCTGG CAACCATGCG TAATATCCGG CAGAACCTGT TTTTCGCTTT TTGCTATAAC
GCCCTCGGCG TGCCCATCGC TGCGGGGGTG CTCTATCCGG TATTCGATTT GTTGCTTAGT
CCCATGATTG CCGCTGCGGC CATGAGTTTC AGCTCCGTAT CGGTGGTCAG CAACGCCCTC
AGGCTTCGCC GCGTGAAGTT GTAA
|
|---|
| Protein sequence | MKDPVCGMDV IPEKAAGKTE HQGKDYYFCS VKCLEKFKQD PEEYLDKARK EKRKAASKDD
RREYTCPMHP EVEQIGPGSC PKCGMDLEPK VISLEEEEDT SELKGWVRRF WVAAVLSLPV
LLLAMGELIP GIGGWIKNLA DPYTRNWIEL ALATPVVLWC GWPILVRYWQ SLVNRSMNMF
TLIGLGVGVA YLYSIVATLW PEFFPISFRG PEGEVAVYFE AAAVITTLVL MGQVMESRAR
SQTGKAIRAL LGLAAKTARR IDDDGNEEDV PLEAVEVGDR LRVRPGEKVP VDGVVLEGTS
SIDESMISGE PLPVGKQPGE PVTGATVNQT GSIIMKAERV GADTLLSQIV QMVAEAQRSR
APIQKLADMV AGYFVPTVVA VALITFVVWS LAGPEPRMAH ALINAVAVLI IACPCALGLA
TPMSIMVATG KGATLGVLFK NAEAIEHLRK VDTLVVDKTG TLTEGKPKLV AVEATGMEDD
ELLRLAASLE RGSEHPLAEA IVQGAQDRKV ELTKADDFES LTGKGVIGRV DGKEVVLGTQ
ALLKERNIDA ENLLSKAETL RKEGQTAMFI AVNGQPAGLL AVADPIKETT PQAIRQLHQS
GIRIVMLTGD NLTTAKAVAD RLNIDEVRAE VLPQDKALKV KELQEDGRFV AMAGDGINDA
PALAQAQVGI AMGTGTDVAM ESADVTLVKG DLRGIVRARS LSLATMRNIR QNLFFAFCYN
ALGVPIAAGV LYPVFDLLLS PMIAAAAMSF SSVSVVSNAL RLRRVKL
|
|---|
| |