Gene Pcar_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1672 
Symbol 
ID3724375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1952856 
End bp1954043 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content56% 
IMG OID637751270 
Producthypothetical protein 
Protein accessionYP_357086 
Protein GI77919271 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0953681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCA AAAAAAAGAC CGTTCGACGA AAACGCCAGC CGCGAAAAAA GCAGCCGGAC 
CGCACCTTCA AGGTTTTGCT GGCCTCATTG TTCCTTGTGG GATTTCTCGT TGTTTCCCTT
GTGTTGTTGA CTTTTGTCCA GCGACCACCG TTGCCAAATC GGACCCCCGA GGTTTCGCCG
CCCGTAGCGA AACAACCGCC AGACTCGGCC GATACGCGGG ATCAGGTTCT GCGAACCTCG
GTGCAGATAG AGATTGAACG TGCCTTGTGG CGTCAGGGGA TTTCCTTTAC CGGGATGGAT
GTCGTCACCG ACGATCATGT TATGCATTAT CATCTGCCGT CGGTGTATCC GGGACAGGCC
TGGTATGACG GATTGGTTAG GGCCTTGGAG AAGCAGTCTT CCCGGCTGAA GTTCGCATTT
GCTGATGCTC CTGCTCCTTT GGTGCGCGTT TCCGTTAACG GAATTCCAAG TTTCGCTCTG
CATTTCAAGC GTTCCCGGAG CAAACCTGCC AAAGTGCGCC CAAAGGCCCG GATTGCCATC
GTGGTGGATG ATCTCGGTCG CGATCTTCGC ATGTTGCGGC GGCTGCTGGC CATTGATCTC
GATCTGACCA TGGCAGTCAT GCCCGAGGAA CCGCATACGC TGCAATCGGC GGAACTGGCG
CATCGCGCCG GTCGCGAAGT GCTGGTGCAT ATGCCCATGG AACCGGAAAG CTATCCGCGC
AACAATCCCG GCCCGGGAGC GTTGCTGCTC GGGCAGGATC GTTTGGAGAT TGAGCGGCGA
GTAACGCGCA TGTTTGAAAA TGTGCCCCAT GCAGTGGGCG GCAACAATCA TATGGGGTCG
CGTTTTACCC AATATGCCGA GGGCTTGCAG ATTGTTTTCG AGGTGATGAA AAAAAACGGC
TTGTTCTTTG TGGACAGTCG CACAAGTCCC GGATCGGTGG CTTTTCTCGA AGCTCGTCGC
GCCAGGATTC CCGCGGTTTC AAGGGATATT TTCCTCGATA ACAGTCAGAA CGTCGATGCC
ATTGCCCGGC AGATACGTGA AGCGGTGAAG ATGGCTCGGT CCCGTGGCAA GGTGGTGGCC
ATCTGTCATC CTTACCCACA GACGGTGGAG GCTCTGCAGC AGGAAGCGGC GTTTTTACGC
CAGCAGGATG TCGAGGTGGT TCCTGTATCG CGCTTGTTGC GGCATTGA
 
Protein sequence
MATKKKTVRR KRQPRKKQPD RTFKVLLASL FLVGFLVVSL VLLTFVQRPP LPNRTPEVSP 
PVAKQPPDSA DTRDQVLRTS VQIEIERALW RQGISFTGMD VVTDDHVMHY HLPSVYPGQA
WYDGLVRALE KQSSRLKFAF ADAPAPLVRV SVNGIPSFAL HFKRSRSKPA KVRPKARIAI
VVDDLGRDLR MLRRLLAIDL DLTMAVMPEE PHTLQSAELA HRAGREVLVH MPMEPESYPR
NNPGPGALLL GQDRLEIERR VTRMFENVPH AVGGNNHMGS RFTQYAEGLQ IVFEVMKKNG
LFFVDSRTSP GSVAFLEARR ARIPAVSRDI FLDNSQNVDA IARQIREAVK MARSRGKVVA
ICHPYPQTVE ALQQEAAFLR QQDVEVVPVS RLLRH