Gene Pcar_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1658 
Symbolprc 
ID3724361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1936210 
End bp1938369 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content52% 
IMG OID637751256 
Productcarboxy-terminal protease for penicillin-binding protein 3 
Protein accessionYP_357072 
Protein GI77919257 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.05852e-14 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AAAAAATACG CTTTTATCTG CTTGCCGTTA TTTTGCTGAT CGCAGTTTCC 
GGTTCCTGGG TTGGCCTGGC CTCGCAACAA CCTCCCGAAG ATCTCGAGCA TTTGAGAATC
CGCCTCCTGA CGCATCTCAT CAGCCAGCAA ATGAGCACCA ATCATTTCAG TCATAAAGCC
CTCGATGACA CCTTGTCCGC AGCGGCTTTC GATCTGTATG CCCAACAACT CGATTACCAA
AAAAGATTTC TTATTCGCGA GGACATCGAT CGATTGGGTG CGGAACGACA CAATATTGAT
GATCAAATTG TTCGTGGCGA GCTTTCATTG CCTAAAACCG GGGCGCGTTT GTTGCGGCTT
CGGGTGGAAA CGGTTTCCGG GATGATTCCG GAGATTCTGG ATCATGGGTT CGACTTTACG
GTCAACGAGG TTTTTGAGAC TGATCCTGAA AAAATCGACT ATGCCGAGGA TATGGCCGGT
TTAAAAAACC GTTGGCAGCA GATCCTCAAA TACCAGGTGC TGATGCGTTA TGTTCAACTG
TATGAAGAAC AAAACAAGGC GGCTGCATCG TCGGAACATA AAGCCCTTCC GGTCAAGGCC
GTCATAGACG CTGCCCTGCT TGAACAGGCT GTTCAAAAGG TGCGGCGCAG TACGGAGCAT
CTTCTCGATC GCCTTTTGGA GCAGACGGAA AAAGATCATT TCGAGCGTTT TCTCAATGCG
TTCGTTCGAG CCTATGATCC GCATTCGGCT TATCTGGCAC CGGATGCCCT GGAAGATTTC
GAAATCTATA TGAAGGGTTC CTTGGAGGGT ATCGGGGCGA CCTTGCGAGA AGATGACGGG
TTCATCCGGG TCGTTGAAAT CATCCCCGGG AGTCCTGCTG CCAAGCAGGG GCAGCTGGCC
GCTGAAGATA TCATCCTTAA AGTCGGAGAA GGGAACCAGG AGCCGATAGA TGTCACTGAA
ACCCGTTTAC GCGATGCCGT GCGTTTGATC AGAGGGAAGA AGGGTACGGA AGTACATCTG
ACTATTCGTA AGCCGACCGG CGCCGAGCGG GTGATTGCCA TCACTCGTGA TGTTGTCGAA
ATCGAAGAGG GTTTTGCCAA AAGTACCACG GTGCCGGTTT CCGGTCACAA GGGCCAGTGT
TATGGCTATT TGCGGATTCC CTCTTTTTAT CGAGATTTTC AGGGCAGTCG CGAGGGACGA
CAGGCACGCA ATGTTACCGA TGATGTCCGG CGCGAGTTGG AGCAGCTTAA AAAACAGGGA
ATAACCGGCC TTGTTCTGGA TTTAAGGAAT AACGGCGGCG GTTCGCTGTC CGATGCCATT
AGTGTTGCCG GTCTGTTTAT TGCCTCAGGC CCCGTGGTTC AGGTGAAAAG CAGTGATGGA
GATATCCGTG TTTTTGAAGA CGAGGATCCG GGTATCGTCT ATGGCGGTCC GCTGGTGGTT
ATGGTCAACC GATTCAGCGC TTCGGCCTCT GAAATTCTGG CTGGTGCGAT ACAGGACTAT
GGGCGTGGCG TTGTCGTGGG TGGGGACGGG ACGCATGGCA AAGGGACGGT TCAGGCTATT
TTCGACATGG ATCAGCCGCT AACCTATAGT CCTCTGGCCA AACTCAAGCC CTTGGGTGCC
TTAAAGGTTA CCGTGCAGAA ATTTTACCGG ATAAACGGCG GGTCTACTCA GGTTAAGGGG
GTTGAGCCGG ATATTCATTT GCCTGATCGA TTGGCTTTTC TTGAATCCGG GGAAAAATAT
ATCGAATATG CGTTGCCCTG GGATACGATC ACGAACGTTC CATTCAAGCG CTGGAGTCGC
CTTCCGAATG TGGCCGAATT ACGTCGTTTA AGCGAACAAA GAGTCACAAA TGGGCACCGG
TTTGATGCCA TTGTCGCAGA AACACGACGT AATCGCCAGC GTAGTCGGGA TACCCTGCGG
TCTGTCAGGC TGACCGACAT ACTTGAGGAG CGATCGGCTC TGCGTGCAGC AGGCGCCGAA
GATTTCGTAG AGGATCTGGC CTCCAAACGA TTGTCCCCCG ATAAGGATTT TGAAAATCTG
GCGGATGAAA TCTCTGGGGA TTTGTATGTG GGGGAGGCCA TGGCGGTACT TACCGATATG
AAACAGCTGA CGGCCAATTC AGACTCTCGA ATTGCCGGGC AGTTGTCTGC AGTGCATTAG
 
Protein sequence
MKFKKIRFYL LAVILLIAVS GSWVGLASQQ PPEDLEHLRI RLLTHLISQQ MSTNHFSHKA 
LDDTLSAAAF DLYAQQLDYQ KRFLIREDID RLGAERHNID DQIVRGELSL PKTGARLLRL
RVETVSGMIP EILDHGFDFT VNEVFETDPE KIDYAEDMAG LKNRWQQILK YQVLMRYVQL
YEEQNKAAAS SEHKALPVKA VIDAALLEQA VQKVRRSTEH LLDRLLEQTE KDHFERFLNA
FVRAYDPHSA YLAPDALEDF EIYMKGSLEG IGATLREDDG FIRVVEIIPG SPAAKQGQLA
AEDIILKVGE GNQEPIDVTE TRLRDAVRLI RGKKGTEVHL TIRKPTGAER VIAITRDVVE
IEEGFAKSTT VPVSGHKGQC YGYLRIPSFY RDFQGSREGR QARNVTDDVR RELEQLKKQG
ITGLVLDLRN NGGGSLSDAI SVAGLFIASG PVVQVKSSDG DIRVFEDEDP GIVYGGPLVV
MVNRFSASAS EILAGAIQDY GRGVVVGGDG THGKGTVQAI FDMDQPLTYS PLAKLKPLGA
LKVTVQKFYR INGGSTQVKG VEPDIHLPDR LAFLESGEKY IEYALPWDTI TNVPFKRWSR
LPNVAELRRL SEQRVTNGHR FDAIVAETRR NRQRSRDTLR SVRLTDILEE RSALRAAGAE
DFVEDLASKR LSPDKDFENL ADEISGDLYV GEAMAVLTDM KQLTANSDSR IAGQLSAVH