Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1620 |
Symbol | |
ID | 3724320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1895085 |
End bp | 1896905 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637751215 |
Product | chloride channel protein EriC |
Protein accession | YP_357034 |
Protein GI | 77919219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAATA TGTCTGACTT ACTTAAGCCG CGCAGGTCCC TTCACAATCT TGACGTCCGA GCTGTTGGAC GATTCATGTT GCTTAGTGCC CTGGTCGGCC TGGTGGCAGG CGCTGGTGCG CTGGCGTTTT ATTTCGCCAC CGATACGGCA ACGGAGTGGA TTCTTGTTCA TTGGGGCGGG CTGCACACCC CGGGACATGG CAATGCCCTA CAAAGCGGTG GGGTTGTAAA TTCTCTCAAG ATGTCGCATC GATGGTTTCT TTTTGTGATT CCCGTCCTGG GAGGTTTGGT TTCCGGGTGG CTGGTTTTTC GATTTGCCCC CGAAGCCGAA GGGCACGGTA CCGATGCAGC CATTGAGGCG TTTCATCAGA AAAAAGGCCT GATACGAGGC CGAGTCCCGG TTGTGAAGGC CATTGCTTCC GTAGCAACCA TAAGTACCGG GGGCTCAGCC GGAAGGGAAG GGCCTATTGC CCAGATTGGT GCCGGATTCG GGTCGTTTTT AGCCGATCGT TTAAAACTCT CCGTCTCCGA CCGACGCGTT TTGTTGTTGG CAGGCATGGC CGGCGGGGTA GGTGCAACCT TTCGCGCACC TCTCGGCGGG GCACTTTTTG CAGTCGAAGT TCTCTATCAG GATCCCGAGT TCGAGCATGA AGGGCTTATC CCCTGCATCA TCTCCTCGAT TGTAGCCTAC TCTCTGTTTG GAGCCGTGAC CGGATGGAGT CCTTTATTGG CAACGCCTGC CTTTCGTTTC GAACACCCGG TTGAACTGGG TTTTTATCTA CTGCTTGGTA TCGCCTGCGC CATTTTGGGC ACCGGTTATG TGAAGACCTT TTATTATGCC AGGGATCGTT TCGTCGCTTT AAATATGCCA ACCTGGCTGA AACCGGCTTT AGGCGGTCTC ATTCTCGGAG TGATGGCCAT GTTCGTACCG CAAGTGCTTG GTTCGGGATA CGGCTGGGTA CAGGCGGCTC TTTACGGAAA AATGGCGTTG TGGTTGATGG TCCTGCTGGG ATTAGGGAAG ATCATTGCCA CCAGCCTGAC GATTTCCTCC GGAGGTTCCG GAGGGGTGTT CGCTCCGAGC CTGGTAATCG GTGCCATGCT GGGCGGTAGT TTCGGCGCCG TTGTGCATGC CTTGTTTCCC ATGTTGCTGG CCGAGCCGCG GACCTGTGTG ATTATCGGCA TGGCCGGCTT TTTTGCCGGA GTTGCCAATA CGCCCATTGC CACGCTTATC ATGGTAAGCG AATTGACGGG GAATTATGCA TTGCTGGCGC CGCTGATGCT GGTATGCGTG GTTGCCATGG TCTTTTTCCG GCGCAGCTCT ATTTATCAGC AGCAGGTAAC CGGCAGGGTC GATTCGCCCG CTCATCTTGG CGACCTGGTT GTCAATGTCC TGGCCGGCAT CTCGGTCGGA GAACTGGCCG AGTTCGGCAG AGAACCGACC CTGATTCCGG AAGACATGCC GCTGAATGAT ATTATCGAAC AGATGTCAGG TAGCGACACC AACTATTTTC CGGTCATCGA TCGGCAAGGG GAAATGACCG GCATCTTTTC CATCAACGAT TTGCGGCGCA TTCTTCACGA AGAGATCCCG CCATCCCTTA TCCTGGCAAG AGATGTTGCT ATTTCTCAGG TTGTAACCAC TATTCCGGAA GAATCCCTGA CCCTGGCATT GCGTAAGTTT ACCCGGCGCG GTATCGAGGA AATCCCCGTG GTCGATTCGG AGCACCCCGG CAAGGTGTTG TTCATGCTGT CGCGACGCGC GGTATTGACC CGCTATGCCA GCGAGTTGGA AAAGAAAAAA GGGGTTTTTG CAGAAACATG A
|
Protein sequence | MGNMSDLLKP RRSLHNLDVR AVGRFMLLSA LVGLVAGAGA LAFYFATDTA TEWILVHWGG LHTPGHGNAL QSGGVVNSLK MSHRWFLFVI PVLGGLVSGW LVFRFAPEAE GHGTDAAIEA FHQKKGLIRG RVPVVKAIAS VATISTGGSA GREGPIAQIG AGFGSFLADR LKLSVSDRRV LLLAGMAGGV GATFRAPLGG ALFAVEVLYQ DPEFEHEGLI PCIISSIVAY SLFGAVTGWS PLLATPAFRF EHPVELGFYL LLGIACAILG TGYVKTFYYA RDRFVALNMP TWLKPALGGL ILGVMAMFVP QVLGSGYGWV QAALYGKMAL WLMVLLGLGK IIATSLTISS GGSGGVFAPS LVIGAMLGGS FGAVVHALFP MLLAEPRTCV IIGMAGFFAG VANTPIATLI MVSELTGNYA LLAPLMLVCV VAMVFFRRSS IYQQQVTGRV DSPAHLGDLV VNVLAGISVG ELAEFGREPT LIPEDMPLND IIEQMSGSDT NYFPVIDRQG EMTGIFSIND LRRILHEEIP PSLILARDVA ISQVVTTIPE ESLTLALRKF TRRGIEEIPV VDSEHPGKVL FMLSRRAVLT RYASELEKKK GVFAET
|
| |