Gene Pcar_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1620 
Symbol 
ID3724320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1895085 
End bp1896905 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content55% 
IMG OID637751215 
Productchloride channel protein EriC 
Protein accessionYP_357034 
Protein GI77919219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA TGTCTGACTT ACTTAAGCCG CGCAGGTCCC TTCACAATCT TGACGTCCGA 
GCTGTTGGAC GATTCATGTT GCTTAGTGCC CTGGTCGGCC TGGTGGCAGG CGCTGGTGCG
CTGGCGTTTT ATTTCGCCAC CGATACGGCA ACGGAGTGGA TTCTTGTTCA TTGGGGCGGG
CTGCACACCC CGGGACATGG CAATGCCCTA CAAAGCGGTG GGGTTGTAAA TTCTCTCAAG
ATGTCGCATC GATGGTTTCT TTTTGTGATT CCCGTCCTGG GAGGTTTGGT TTCCGGGTGG
CTGGTTTTTC GATTTGCCCC CGAAGCCGAA GGGCACGGTA CCGATGCAGC CATTGAGGCG
TTTCATCAGA AAAAAGGCCT GATACGAGGC CGAGTCCCGG TTGTGAAGGC CATTGCTTCC
GTAGCAACCA TAAGTACCGG GGGCTCAGCC GGAAGGGAAG GGCCTATTGC CCAGATTGGT
GCCGGATTCG GGTCGTTTTT AGCCGATCGT TTAAAACTCT CCGTCTCCGA CCGACGCGTT
TTGTTGTTGG CAGGCATGGC CGGCGGGGTA GGTGCAACCT TTCGCGCACC TCTCGGCGGG
GCACTTTTTG CAGTCGAAGT TCTCTATCAG GATCCCGAGT TCGAGCATGA AGGGCTTATC
CCCTGCATCA TCTCCTCGAT TGTAGCCTAC TCTCTGTTTG GAGCCGTGAC CGGATGGAGT
CCTTTATTGG CAACGCCTGC CTTTCGTTTC GAACACCCGG TTGAACTGGG TTTTTATCTA
CTGCTTGGTA TCGCCTGCGC CATTTTGGGC ACCGGTTATG TGAAGACCTT TTATTATGCC
AGGGATCGTT TCGTCGCTTT AAATATGCCA ACCTGGCTGA AACCGGCTTT AGGCGGTCTC
ATTCTCGGAG TGATGGCCAT GTTCGTACCG CAAGTGCTTG GTTCGGGATA CGGCTGGGTA
CAGGCGGCTC TTTACGGAAA AATGGCGTTG TGGTTGATGG TCCTGCTGGG ATTAGGGAAG
ATCATTGCCA CCAGCCTGAC GATTTCCTCC GGAGGTTCCG GAGGGGTGTT CGCTCCGAGC
CTGGTAATCG GTGCCATGCT GGGCGGTAGT TTCGGCGCCG TTGTGCATGC CTTGTTTCCC
ATGTTGCTGG CCGAGCCGCG GACCTGTGTG ATTATCGGCA TGGCCGGCTT TTTTGCCGGA
GTTGCCAATA CGCCCATTGC CACGCTTATC ATGGTAAGCG AATTGACGGG GAATTATGCA
TTGCTGGCGC CGCTGATGCT GGTATGCGTG GTTGCCATGG TCTTTTTCCG GCGCAGCTCT
ATTTATCAGC AGCAGGTAAC CGGCAGGGTC GATTCGCCCG CTCATCTTGG CGACCTGGTT
GTCAATGTCC TGGCCGGCAT CTCGGTCGGA GAACTGGCCG AGTTCGGCAG AGAACCGACC
CTGATTCCGG AAGACATGCC GCTGAATGAT ATTATCGAAC AGATGTCAGG TAGCGACACC
AACTATTTTC CGGTCATCGA TCGGCAAGGG GAAATGACCG GCATCTTTTC CATCAACGAT
TTGCGGCGCA TTCTTCACGA AGAGATCCCG CCATCCCTTA TCCTGGCAAG AGATGTTGCT
ATTTCTCAGG TTGTAACCAC TATTCCGGAA GAATCCCTGA CCCTGGCATT GCGTAAGTTT
ACCCGGCGCG GTATCGAGGA AATCCCCGTG GTCGATTCGG AGCACCCCGG CAAGGTGTTG
TTCATGCTGT CGCGACGCGC GGTATTGACC CGCTATGCCA GCGAGTTGGA AAAGAAAAAA
GGGGTTTTTG CAGAAACATG A
 
Protein sequence
MGNMSDLLKP RRSLHNLDVR AVGRFMLLSA LVGLVAGAGA LAFYFATDTA TEWILVHWGG 
LHTPGHGNAL QSGGVVNSLK MSHRWFLFVI PVLGGLVSGW LVFRFAPEAE GHGTDAAIEA
FHQKKGLIRG RVPVVKAIAS VATISTGGSA GREGPIAQIG AGFGSFLADR LKLSVSDRRV
LLLAGMAGGV GATFRAPLGG ALFAVEVLYQ DPEFEHEGLI PCIISSIVAY SLFGAVTGWS
PLLATPAFRF EHPVELGFYL LLGIACAILG TGYVKTFYYA RDRFVALNMP TWLKPALGGL
ILGVMAMFVP QVLGSGYGWV QAALYGKMAL WLMVLLGLGK IIATSLTISS GGSGGVFAPS
LVIGAMLGGS FGAVVHALFP MLLAEPRTCV IIGMAGFFAG VANTPIATLI MVSELTGNYA
LLAPLMLVCV VAMVFFRRSS IYQQQVTGRV DSPAHLGDLV VNVLAGISVG ELAEFGREPT
LIPEDMPLND IIEQMSGSDT NYFPVIDRQG EMTGIFSIND LRRILHEEIP PSLILARDVA
ISQVVTTIPE ESLTLALRKF TRRGIEEIPV VDSEHPGKVL FMLSRRAVLT RYASELEKKK
GVFAET