| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1604 |
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| Symbol | hndC-3 |
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| ID | 3724304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1873213 |
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| End bp | 1874673 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751199 |
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| Product | NADP-reducing hydrogenase chain C |
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| Protein accession | YP_357018 |
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| Protein GI | 77919203 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTC AGCTTAGAAT AGCCACCCGC AACAGCGGGT TTATCGATCC GGAATCCGTC
GAGTCTTACA TTGCCGTCGG CGGCTACCAG GCTCTGGGCA AATGCCTGTC CAAAATGAAG
CCTGCCGACG TTATCGAACT GATGAAAAAC AGCGGTCTGC GCGGCCGTGG CGGCGCAGGT
TTCCCCACCG GTGTAAAATG GGGTTTTGCC GCCAAGTACG AGTCCGACAT CAAGCATGTC
GTATGTAACG CCGACGAAGG TGACCCGGGG GCATTCATGG ACCGCGCGGT TCTCGAAGGC
GACCCGCACA GCGTTCTCGA AGCTATGGCC ATTGGCGCTT ACGCCATCGG CGGCAACAAA
GGCACCATCT ACATCCGTGC CGAGTACCCG CTGGCCATTG CCCGTCTGAA AATGGCCATC
GAGCAGGCCA AGGAAATGGG CGTGCTGGGC GACAACATCA TGGGCACCGA TTTCTGTTTC
GACCTCGAGT TGAAATACGG CGCCGGTGCG TTTGTCTGTG GCGAGGAAAC CGCCCTGATC
AACTCCATGG AAGGTAACCG CGGCGAGCCT TACACCAAGC CTCCTTTCCC TGCTGAAGCC
GGTTACTGGA ACAAGCCGAC CATCGTGAAC AACGTCGAGA CCCTGGCCAA CATCCCGGCC
ATCATCATGA AGGGCGCTGA CTGGTTCAAC AAGATCGGTA CCGAAACTTC CAAGGGCACC
AAGGTTTTCT GTATCTGCGG TAAGATCGCC AATGTCGGTC TGATCGAGGT TCCCATGGGA
ACCACCCTGA AAGAAGTTAT CTACGATATC GGCGGCGGTA TCCCCGGCGG CAAGGAATTT
AAAGCCGTTC AGACCGGTGG ACCTTCCGGC GGTGCTTTGA CCTACAAAGA CCTCGATGCT
CCTATCGACT ACGAAAACCT CGTGGCACGC CAGTCGATGA TGGGTTCCGG CGGCATGATC
GTCATGGACG AAGAAGACTG CATGGTGTCG GTTGCCAAGT TCTTCCTCGA CTTCACCATG
GACGAAACCT GCGGCAAATG TACGCCCTGC CGGATCGGCT CCAAGCGTAT CTACGAACTG
CTTGACAAAA TCACCATCGG TCAGGGTACC GAGGAAGATC TGGAAAAACT GCGCAGCCTG
TCGGTGAACA TCAAGGACAC CGCTCTGTGT GGCCTGGGCC AGACCATGCC TAACCCGGTA
TTGTCGACCA TGCGCGTGTT CGAAGACGAG TACCGCGCGC ACGTCATCGA CAAGAAATGT
CCTGCCGGCG TTTGCGCCGA ACTGCTCGAA TACACTGTTG TGGACCAGAA GTGCGTTGGC
TGTACCCTGT GCGCCAAAGT CTGCCCGGTT AACTGCATCA GCGGTAAGCC GAAAGAAGTC
CATGTCATCG ACCAGGCTGC ATGTATCAAG TGCGGCGCAT GTCTGGACAA GTGTAAGTTC
GACGCCATCA TCAAACAGTA A
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| Protein sequence | MATQLRIATR NSGFIDPESV ESYIAVGGYQ ALGKCLSKMK PADVIELMKN SGLRGRGGAG
FPTGVKWGFA AKYESDIKHV VCNADEGDPG AFMDRAVLEG DPHSVLEAMA IGAYAIGGNK
GTIYIRAEYP LAIARLKMAI EQAKEMGVLG DNIMGTDFCF DLELKYGAGA FVCGEETALI
NSMEGNRGEP YTKPPFPAEA GYWNKPTIVN NVETLANIPA IIMKGADWFN KIGTETSKGT
KVFCICGKIA NVGLIEVPMG TTLKEVIYDI GGGIPGGKEF KAVQTGGPSG GALTYKDLDA
PIDYENLVAR QSMMGSGGMI VMDEEDCMVS VAKFFLDFTM DETCGKCTPC RIGSKRIYEL
LDKITIGQGT EEDLEKLRSL SVNIKDTALC GLGQTMPNPV LSTMRVFEDE YRAHVIDKKC
PAGVCAELLE YTVVDQKCVG CTLCAKVCPV NCISGKPKEV HVIDQAACIK CGACLDKCKF
DAIIKQ
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