| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1561 |
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| Symbol | pnp |
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| ID | 3724260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1825757 |
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| End bp | 1827856 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751156 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_356976 |
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| Protein GI | 77919161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000108143 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTTATC AAAAAGTAGA ATGTCAGTTC AATGGGCAGA CACTTACCCT TGAAACCGGC
AAAATGGCCC GTCAGGCCGA TGGTGCCGTG GTTGTCAGCT TCGGCGGCAC CAAAGTTCTG
TGTACTGCCG TCAGTGCCAA GCAGATGCGC GAAGGACAGA GCTTTTTCCC TCTTACCGTC
AATTATCAGG AAAAATTTTA TGCCGGTGGC AAAATTCCCG GCTCTTTCTT CCGCCGGGAA
CGTGGCGCCA CTGAGCGCGA AACCCTGGTG TGTCGTCTGA TCGACAGACC CTTGCGACCT
CTTTTTCCTA AAGGATATAT GTTTGAAACC CAGATCATGC CGACTGTGAT CTCGGTTGAC
GAACAGAACG ATCCCGACAC CTTGGCTATG GTCGGCGCTT CCGCTGCCAT CGCCGTATCC
GACATTCCCT TCGACGGGCC TGTTGCTGCC GTTCGTGTCG GTCGTGTCGA AGGTAATTTG
ATCGCCAATC CGACCATTGA GCAGCGAGCC GAAAGCGATA TGGATATTAT CGTTTCCGGT
TCCCGCGATG CCATCATTAT GGTCGAGGGC GAAACACGGT TTATCAGCGA GCAGGAAATG
CTCGATGCGC TGTTCTTCGC TCATGAGGCG ATTCAGCCTC TGATCGATGT TCAGCTTGAA
CTGGTCAAAA TCGCCGGTAA GGAAAAACGC GAATTTTCCG TGCCGGAAAT CGATCCTGCG
GTTGTGGAAA AGGTTGCGGA ACTGGCAGAA ACCCGTCTGT CCGAAGCTGT TAAAATCCGT
ACCAAGCAGG ACCGTTATGC TGCTGTGGCA GAAATCAAAA CGGAAATACT GGAAACCCTG
GCCGCCGATT TTGAAGATCA GGAAGACGAT ATAAGCGAGG CTTTCGGCAA TTTGCAAAAA
CGCCTTGTGC GTCAGATGGT CGCTCGCGAC AAGGTCCGTA TCGATGGCCG CGACAAGAAT
ACCATTCGTC CGATTACATG CGAAATCGGT CTGTTGCCCC GCGCCCATGG CAGTGCCTTG
TTTACCCGGG GAGAAACGCA GGCGTTGGTG GCTGCAGCCC TTGGTACCTC CAAAGACGAG
CAGCGCATGG ACAATGTGCA GTCTATGGAA TTTAAAAAAT TCATGCTGCA CTATAACTTT
CCGCCGTTCT GCGTAGGCGA AACCAGCATG CGCCTGTTTC CCGGACGTCG TGAAATCGGC
CATGGTATGC TTGCCGAGCG CTCTATTGCG CAGGTGTTGC CCAACCACGA TGACTTCCCC
TATACGCTAC GCGTTGTCTC CGATATCCTG GAGTCCAACG GCTCTTCTTC CATGGCCAGT
GTCTGCGGTG CCTCTCTGGC GCTGATGGAT GCCGGTGTAC CTGTCAGCGA AGCCGTTGCC
GGTATCGCTA TGGGGCTGAT CAAAGAGGGC GATGATATCG TCGTTCTTTC GGATATCCTT
GGCGACGAAG ACCACCTTGG CGATATGGAC TTCAAGGTCA CCGGTACCCG TGAAGGGATC
ACCGCTCTGC AGATGGATAT CAAAATTAAA GGTGTCAGCA AGGAAATCAT GCAGCAGGCA
CTGGAGCAGG CCAGGGAAGG TCGTCTTCAC ATTCTGGATA AAATGGCGGA AGCCATCACC
GCTCCGCGGA GCGATCTGTC GCCCTACGCG CCGCGCATCA CGACCATACA GGTTAAACCG
GACCAGGTGC GTACCGTTAT CGGACCGGGC GGGAAAAACG TTCGCGGAAT TATCGAAGCA
ACGGGGTGCG CCATCGATAT CGAAGATGAT GGCCGTATCA ACATCGCTTC GGCGGATGGG
GATGCCTGCA AGGCCGCCAT CAAAATGATC CGGAATCTCA CTCAGGAGGC CGTTGTCGGC
AAGCTTTATA TGGCGACCGT CAAAAAGATC ATGGAATTCG GTGCGTTTGT GGAGATTTTC
CCCGGCACGG AAGGCCTGGT GCATATTTCC GAACTGGCCA AGGAACGTGT CAAAAAGGTC
ACCGATATTT TGCAGGAAGG TGATCAGGTT CTTGTTAAAT GCCTGGATAT CGACCGGCAA
GGCAAGATCA AGTTGTCTCG TAAGGAAGCC TTGGGGCAAT CCCTGCCGGA AGAAGGGTAA
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| Protein sequence | MAYQKVECQF NGQTLTLETG KMARQADGAV VVSFGGTKVL CTAVSAKQMR EGQSFFPLTV
NYQEKFYAGG KIPGSFFRRE RGATERETLV CRLIDRPLRP LFPKGYMFET QIMPTVISVD
EQNDPDTLAM VGASAAIAVS DIPFDGPVAA VRVGRVEGNL IANPTIEQRA ESDMDIIVSG
SRDAIIMVEG ETRFISEQEM LDALFFAHEA IQPLIDVQLE LVKIAGKEKR EFSVPEIDPA
VVEKVAELAE TRLSEAVKIR TKQDRYAAVA EIKTEILETL AADFEDQEDD ISEAFGNLQK
RLVRQMVARD KVRIDGRDKN TIRPITCEIG LLPRAHGSAL FTRGETQALV AAALGTSKDE
QRMDNVQSME FKKFMLHYNF PPFCVGETSM RLFPGRREIG HGMLAERSIA QVLPNHDDFP
YTLRVVSDIL ESNGSSSMAS VCGASLALMD AGVPVSEAVA GIAMGLIKEG DDIVVLSDIL
GDEDHLGDMD FKVTGTREGI TALQMDIKIK GVSKEIMQQA LEQAREGRLH ILDKMAEAIT
APRSDLSPYA PRITTIQVKP DQVRTVIGPG GKNVRGIIEA TGCAIDIEDD GRINIASADG
DACKAAIKMI RNLTQEAVVG KLYMATVKKI MEFGAFVEIF PGTEGLVHIS ELAKERVKKV
TDILQEGDQV LVKCLDIDRQ GKIKLSRKEA LGQSLPEEG
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