Gene Pcar_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1506 
Symbol 
ID3723770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1760458 
End bp1760868 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content53% 
IMG OID637751102 
Productbiopolymer transport protein 
Protein accessionYP_356922 
Protein GI77919107 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000178844 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTTC TTCGTAAAAA ACGTGAAGCA CCGCGTGTCG ACCTGACCTC CATGGTGGAC 
GTGGTTTTTC TGTTGCTGAT ATTTTTCATG ATCTCTACCA CCTTTGTCGA GGCGCCGGGT
ATCGACGTCA AGCTGCCTGA ATCTTCCTCG CAGGTTTCCG AATCCGAAGT CCGCGAGGTG
AAGGTCTATC TGTCGCAGGA CGGTGAGATA TCGCTTGGCA AGGAGAAGGT TTCCCAGCAA
GAGCTCGAGC GGCGCCTTCG CGCTTACAGA TCTGAGGCCG GTGCCATGAC CTTTGTATTG
CTCGCTGACA AAAATGCCCT GCATGGTCAG GTGGTGCGGC TTATGGACCT GGCTAAAGTG
AATGGGTTTG GAAAGCTTGC CATAGCTACG GAGTATGCCA AAAATCCATG A
 
Protein sequence
MAFLRKKREA PRVDLTSMVD VVFLLLIFFM ISTTFVEAPG IDVKLPESSS QVSESEVREV 
KVYLSQDGEI SLGKEKVSQQ ELERRLRAYR SEAGAMTFVL LADKNALHGQ VVRLMDLAKV
NGFGKLAIAT EYAKNP