Gene Pcar_1444 details

Gene Information

• Locus tag: Pcar_1444
• Symbol: nrdR
• ID: 3723816
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1689591
• End bp: 1690064
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637751037
• Product: transcriptional regulator NrdR
• Protein accession: YP_356860
• Protein GI: 77919045
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 68
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATGTC CATTTTGTGG ATTTGCCGAT ACGCGGGTCA TCGATTCGCG TCTCGGTAAA 
GAGGGCAACA ATATCCGTCG GCGGCGAGAA TGTTCTCAGT GCGAACGTCG GTTTACGACT 
TTTGAACGTG TCGAGGACAT GTTACCCCTC ATCATTAAAA AAGATGCCCG CAGGCAGCCT 
TTTGATCGTA AGAAGGTCAT CGGCGGAATC CAGCGGGCCT GCGAAAAACG CCCGGTTTCC 
ATCGCTACCA TAGAAAAGAT CGTTGATACT CTGGAGCGCC AGTTGCAGGA ATCCGGCGAA 
CGTGAAATCG AGTCCAAAAT CATCGGACAG GCTGTCATGG ACGCCTTGCA CGACCTGGAT 
CAGGTGGCCT ATGTACGCTT TGCTTCCGTT TATCGGCAAT TCAAGGATAT CAACGAGTTT 
ATGGCGGAAT TGAAGGATAT CCTGGCTGAA GGCGGCAACG TCAGGGATAA TTGA 

 

Protein sequence

MKCPFCGFAD TRVIDSRLGK EGNNIRRRRE CSQCERRFTT FERVEDMLPL IIKKDARRQP 
FDRKKVIGGI QRACEKRPVS IATIEKIVDT LERQLQESGE REIESKIIGQ AVMDALHDLD 
QVAYVRFASV YRQFKDINEF MAELKDILAE GGNVRDN