Gene Pcar_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1425 
Symbol 
ID3723852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1673634 
End bp1673984 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID637751017 
Producttranscriptional regulator 
Protein accessionYP_356841 
Protein GI77919026 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000000104332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAT CCATCCCTGA TAAGCTTTAC TTTAAGATCG GTGAGGTGGC GCAGTTGACA 
GGCGTCAAGC CTCATGTCCT GCGTTACTGG GAATCCGAGT TCCGACAAAT TCGCCCGGTT
AAAAGTCAGG GTAAGCAGCG ACTTTATCGA CGCGACGATA TCGAATTCGT TCTTAACCTG
AAAGATATCC TGTACGGACA AGGGTATACG ATCGCCGGTG CAAAAAAAAT ATTAGCCAAA
CAGGCTGGTT CCGAAAAGGC AGCCTCCTCG GTTAATCCGG AGGAGGCTGT TGAACTTTTG
CGCGACATAC GTCGGGACTT ACTGCAATTA AGAGCCTCGC TGGAGCCGTG A
 
Protein sequence
MQVSIPDKLY FKIGEVAQLT GVKPHVLRYW ESEFRQIRPV KSQGKQRLYR RDDIEFVLNL 
KDILYGQGYT IAGAKKILAK QAGSEKAASS VNPEEAVELL RDIRRDLLQL RASLEP