Gene Pcar_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1423 
SymbolpheT 
ID3723850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1670635 
End bp1673049 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content53% 
IMG OID637751015 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_356839 
Protein GI77919024 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0017592 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTA CCTATAATTG GTTGAAAGAG TTTGTCGATT TTGAAATGAG TCCGGATGAA 
TTGGCCCATC GCTTGACCAT GGCCGGTCTT GAAGTCGATA GTATGGATTT TATTGGTGAG
GGTCTTGACA GCGTCGTGAC TGCTCGACTG GTTTCCGTCG ATAAGCATCC CGATGCCGAT
AAGTTGACTG TTTGTCAAGT GGATTACGGT CAGGATACGG TGCAGGTAGT TTGCGGTGCA
ACCAACCATA AGGCTGGAGA TGTCGTCGCG TTAGCCACGG TGGGGACCGT CCTGCCTGGC
GATTTTAAAA TTAAAAAGTC CAAGATTCGC GGCATGGAGT CGTTCGGGAT GCTCTGCTCT
GAAAAAGAAC TTGGGCTTGC TCAAGATTCC GACGGTATCA TGATCCTGTC TCCCGATTGT
GAGCCTGGGC AACCCGTGTT CGAAGTTTTG GGGCTTAAGG ATGTTCGTTA CGAGCTTGGA
TTGACCCCCA ATCGTCCCGA TTGTCTCAGC GTACTGGGGG TGGCAAGGGA AGTTTCCGCG
ATGTGCGGAC GTTCTTTGAA CGTAAATTTA CCTCCTTTGT CCGAGGGGGA TGAGTCGACC
CGGGCGCTTA CTTCGGTAAC CATTGAGGAT GCAGAGTATT GCCCGCGCTA CGCCGCTCGT
CTGATTCGCG GTGTAAAGGT CGGGCCTTCT CCGGACTGGT TGGTGAGGAA ATTGGAGTCG
GTGGGGCAAC GGTCGGTTAA CAATGTCGTT GACGTAACCA ACTTTATCCT TATGGAATTG
GGGCATCCGC TGCATGCTTT CGATTATCAG CGCCTGGCCG AAGGGCGCAT CGTTGTAAAA
CGCGCCGCCA GCAAGGAACA GTTTACCACT CTCGATAGCG TCAGTCGCAG TCTTGAAAAA
AGCGACCTGG TGATTTGTGA TGGCCAGGGG GCAGTTGCTT TGGCCGGCGT TATGGGTGGC
GAAAATTCCG AGGTTGTGGC TGAAACGGTT GATATCCTGC TTGAAAGCGC CTATTTCAAT
CCCTTGGCCA TTCGTCGGAC CAGCAAACGC CTGTCGTTGC GCAGCGAGGC GTCCCATCGG
TTCGAACGTG GCGCCGATAT CGCTATGGTG CCGGTTGCTC TGGATAAGGC TGCCGCGCTT
ATCGTTCAGG TCGCCGGAGG TGTCGTTTGC AAGGGGATGA TAGACGAATT CCCCCGTCCG
TTGGCCGAAC GCAAGGTGAC CTTGGCCGTT CAGCGTGTCA ATGAAATCCT CGGCCTTAAG
CTGGGGATGG ATGATATTCA GGCTCACTTG CTCTCTATCG GCCTGGAGGT GCAACCGGTT
GAAGAAAAAG ACATCGACCG ACTGGTGGTC ACCATACCGT CTTTTCGTCC CGACCTGGAA
AGAGATATCG ACCTGGTTGA AGAGGTGGCA CGACTTAACG GTTATGACAA TATCCCTGTG
ACGATGCCCG CCGGTCGTAT GCTCTGTCAT CTTCCTCCGC AGCATTTGAG GGAAGTTAAA
CGTTTGCGCG ACGTCATGGT TGCTGCCGGC TTTAACGAAA CGGTTAATTA CTCTTTTGTG
GCGCCAGAGG CCTGGGATCG CCTGGAGCTG TCGGACGATG ACCCGCGTCG GGAACCGGTT
AAAATTCTCA ATCCTCTGAC TGAAGATCAG TCGGTTATGC GTACCAGTCT GGTGCCCAGC
TTGTTGGAAT GCGTTACGCG GAATGTGGCT TATCAGAATA GCGACCTGCA TCTGTTCGAG
CTGCGCCCTG TGTTCTTGAC GCATACGGAC GATGTGCTTC CTATCGAAAA GTGGCGACTT
TGTGCCGTTT TGTGTGGTCG TCGCGAACAG GAAGGCTGGA GGCAGAATGA CGAAAAAGTC
GATTTTTACG ATCTTAAAGG GGTCGTTGAA CAGATCCTGG ACAGCTTTAA TGTCGCCAAA
GTGACCTGGG ATGGAAGTTC CAGTGAGAAC TTTCTCCACC CTGGTAAATC CTGTACCTTG
AAGCAGAAAA AGACAGTATT GGGCACTCTG GGCGAAGTTC ATCCCAAGGT GTTGGCCGCT
TTTGATATCG ACCAGCCTGT TTATCTGCTG GATCTCGATT TCGAGCAGTT GCTTATGGCG
GCCGGCGGTC ATGGTGGTTT CAGTGCACTC TCCCGGTTTC CGCAAGTTGC CAGAGACAGT
GCCTTTCTGG TCGATGAAGA CATCCCCTTC AGTGAAATCT CCGAGGTATT GAACCGGTCC
ACAGGCAAGC TGGTAGAGGA TATCGTATTG TTTGACGTAT ACCGGGGTAA AGGGATTCCC
GAAGGCAAGA AGAGTTTGGC CATCCGGGTG CGTTACCGCA GTGACGATCG AACGCTCAAG
GATGAAGAAA TCCAAAAAGC CCATGATAAG ATTGTTAAGG CGCTGATCGC CAAACTCGGG
GCCGAAATAC GCTAA
 
Protein sequence
MIVTYNWLKE FVDFEMSPDE LAHRLTMAGL EVDSMDFIGE GLDSVVTARL VSVDKHPDAD 
KLTVCQVDYG QDTVQVVCGA TNHKAGDVVA LATVGTVLPG DFKIKKSKIR GMESFGMLCS
EKELGLAQDS DGIMILSPDC EPGQPVFEVL GLKDVRYELG LTPNRPDCLS VLGVAREVSA
MCGRSLNVNL PPLSEGDEST RALTSVTIED AEYCPRYAAR LIRGVKVGPS PDWLVRKLES
VGQRSVNNVV DVTNFILMEL GHPLHAFDYQ RLAEGRIVVK RAASKEQFTT LDSVSRSLEK
SDLVICDGQG AVALAGVMGG ENSEVVAETV DILLESAYFN PLAIRRTSKR LSLRSEASHR
FERGADIAMV PVALDKAAAL IVQVAGGVVC KGMIDEFPRP LAERKVTLAV QRVNEILGLK
LGMDDIQAHL LSIGLEVQPV EEKDIDRLVV TIPSFRPDLE RDIDLVEEVA RLNGYDNIPV
TMPAGRMLCH LPPQHLREVK RLRDVMVAAG FNETVNYSFV APEAWDRLEL SDDDPRREPV
KILNPLTEDQ SVMRTSLVPS LLECVTRNVA YQNSDLHLFE LRPVFLTHTD DVLPIEKWRL
CAVLCGRREQ EGWRQNDEKV DFYDLKGVVE QILDSFNVAK VTWDGSSSEN FLHPGKSCTL
KQKKTVLGTL GEVHPKVLAA FDIDQPVYLL DLDFEQLLMA AGGHGGFSAL SRFPQVARDS
AFLVDEDIPF SEISEVLNRS TGKLVEDIVL FDVYRGKGIP EGKKSLAIRV RYRSDDRTLK
DEEIQKAHDK IVKALIAKLG AEIR