Gene Pcar_1418 details

Gene Information

• Locus tag: Pcar_1418
• Symbol: thrS
• ID: 3723845
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1666242
• End bp: 1668158
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637751010
• Product: threonyl-tRNA synthetase
• Protein accession: YP_356834
• Protein GI: 77919019
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000000102997
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCATGA TTCAGATCGA ATTGCCGGAC GGATCTATTA AGGAATTTTC TGAAACGACC 
ACTCCTGGTG ACATCGCAGC CGGTATCGGA TCCGGTCTCG CGCGCCAGGC GGTGGCTGCA 
CGATTTAACG ATCGTATGGT CGATCTGTGC ACCCCGATTA CGGAAAGCGG CCGTCTTGAA 
ATTATCACCC TGAATTCTCC GCAGGGACTT GAGGTCTATC GGCATACCGC CGCACATCTT 
ATGGCCCATG CGGTCAAGGA TCTTTACGGT GACCGGGTTC AGGTTACCAT CGGTCCGGCT 
GTCGAAAACG GTTTCTATTA CGATTTTTAC TGTGAAGACC ATGCATTCTC TCCGGACGAT 
TTCGAAAAAA TCGAGAAGCG GATGCAGGAA CTGGTCAAGG CCAACCTGCC CATTGAGCGG 
GAGGAGGTTT CGCGGGACAG TGCCATTGCC CTGTTTCGGG AGCTTGGAGA GCATTACAAA 
GTCGAATTGA TAGAGGACTT GGATGCGCCG ACCGTCTCGC TCTACCGCCA GGGCGATTTC 
GTCGATTTGT GCCGTGGTCC GCATTTGCCC TCCACCGGCA GAATCAAGGC ATTCAAGCTG 
ACCAGTGTGG CTGGTGCGTA TTGGCGTGGC AGCGAGAAGA ATGCCATGTT GCAGCGCATC 
TATGCGACGG CCTTTCCCGA TAAAAAAGAA CTCCGCACCT ATCTGAACAA GCTGGAAGAA 
GCTCGCAAGC GCGATCATCG GCGTATCGGA CGCGAACTCG ATCTGTTTTC CTTCAGCGAA 
GAGGCCGGTG CCGGGTTGGT GATCTGGCAT CCCAAGGGTG CCCTGCTGCG CACCTTGCTG 
GAGGATTTTG AGCGTCGGGA GCATTTGCGG CGTGGCTACG ACATTGTCAT GGGGCCGCAG 
ATCCTTCGTA CGGATCTGTG GAAAACCTCC GGACATTTCG ACAATTACCG TGAAAATATG 
TATTTCACGG ATGTCGACGG GCAGGGGTAC GGCATCAAGC CGATGAACTG CCTCGCACAT 
ATGCTTATCT ATAAAGCTCG GCAACGATCC TATCGGGATC TGCCGCTGCG ATATTTCGAA 
CTCGGTACCG TTCACCGCCA TGAAAAATCC GGTGTGTTGC ATGGTCTTTT GAGGGTTCGG 
GGCTTTACCC AGGATGATGC GCACATAATC TGTACGCCGG ACCAGCTTGA CGAAGAGATC 
AAGCGTGTAC TGGAGTTCGT GCGCGATGTG ATGGCTATCT TCGGTTTTGA GTACGAGATA 
GAGATTTCCA CGCGTCCTGA AAAATCGATC GGCAGCGATG CGGACTGGGA GCGTGCAACC 
GGGGCCTTGA TGAACGCGCT GAAGGATCTT GAGCTCCCGC ATGATGTTAA CGAAGGCGAC 
GGGGCGTTTT ACGGTCCCAA GATCGATATC AAGCTTAAGG ACGCCCTTGA CAGAAGATGG 
CAGTGTGCTA CAATCCAGTG CGATTTTACC CTGCCTGAGC GTTTCGACCT CACTTATGTC 
GGCAAGGATG GTGAAAAACA CCGGCCGGTT ATGCTGCACC GGGTTATACT TGGCGCAATC 
GAACGTTTCA TCGGCGTTCT GATCGAACAC TATGCCGGCA ATTTTCCGTT ATGGCTTGCC 
CCCGTGCAGG CTGTTGTTAT CAATGTGACG GATAATCAGG CCGACTACGC CAAAAGCGTT 
TCCGACGCCT TGCGAGCCGC CGGAGTTCGT GTTCAATGCG ACCTTCGGAA TGAAAAACTT 
GGCTTCAAGA TCAGAGAGGC CCAGGTGGAT AAGATTCCGT ATATGCTGGT TGTCGGGGAT 
ACGGAAATGA GCGATGGAAC CGTGGCTCCA CGTTTCCGGT CCGGCAAAAA CCTGGAACCC 
ATGAGTCCTG AAGACTTTGC ACGGTTTGTT CAGGAAGAGT GTGATCAGTA TCGTTAG 

 

Protein sequence

MVMIQIELPD GSIKEFSETT TPGDIAAGIG SGLARQAVAA RFNDRMVDLC TPITESGRLE 
IITLNSPQGL EVYRHTAAHL MAHAVKDLYG DRVQVTIGPA VENGFYYDFY CEDHAFSPDD 
FEKIEKRMQE LVKANLPIER EEVSRDSAIA LFRELGEHYK VELIEDLDAP TVSLYRQGDF 
VDLCRGPHLP STGRIKAFKL TSVAGAYWRG SEKNAMLQRI YATAFPDKKE LRTYLNKLEE 
ARKRDHRRIG RELDLFSFSE EAGAGLVIWH PKGALLRTLL EDFERREHLR RGYDIVMGPQ 
ILRTDLWKTS GHFDNYRENM YFTDVDGQGY GIKPMNCLAH MLIYKARQRS YRDLPLRYFE 
LGTVHRHEKS GVLHGLLRVR GFTQDDAHII CTPDQLDEEI KRVLEFVRDV MAIFGFEYEI 
EISTRPEKSI GSDADWERAT GALMNALKDL ELPHDVNEGD GAFYGPKIDI KLKDALDRRW 
QCATIQCDFT LPERFDLTYV GKDGEKHRPV MLHRVILGAI ERFIGVLIEH YAGNFPLWLA 
PVQAVVINVT DNQADYAKSV SDALRAAGVR VQCDLRNEKL GFKIREAQVD KIPYMLVVGD 
TEMSDGTVAP RFRSGKNLEP MSPEDFARFV QEECDQYR