Gene Pcar_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1401 
Symbol 
ID3723037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1645986 
End bp1647359 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content51% 
IMG OID637750990 
Producthypothetical protein 
Protein accessionYP_356817 
Protein GI77919002 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.536513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGATT TGTCAGGGGC ATGTTACGTT AACCCGCATT TTAACCAGGA AAGGAGAAGA 
ACAATTTTAT TGCAGAATCA GAGGAAGATA GCTAAAAAAT TCGGTGGCAA AGATACATTT
ACAAATCATT GGGAGGACTG GAAATGGCAT GCTAAGCATG CTATTCAAGA TATCGATACA
TTCGAACGTA TAACGGGTAT CAAGCTTGAC CCTAAATTTC GTGAAAACGT TGCGTTAACA
CTCGAAAAAT TCCCACTCTC CATCACTCCA TATTACGCAT CCCTTATTGA TCCCGAAGAT
TATCAAAACG ACCCCGTTTT TATTCAGTCA TTTCCGTCCC CCCATGAGTT GGAGGTGGAC
CCTCGCGAAA TGGCCGACCC CCTTGCGGAA GACAAGGACA GTCCGGTGCC CGGGATTACC
CATCGTTATC CGGATCGTGT CCTGTTTCAC GTGAGCAATC TGTGCGCCAT GTACTGCCGC
CATTGCACGC GCAAGCGAAA AGTTGGCGAT CAGGATTCCA TCCCCGGACG GGAAGAAATC
AAGCAGGGTC TTGAATATAT CGCCGAGAAT CCCCAGATCC GCGACGTATT GCTGTCCGGT
GGCGATCCGC TGATGCTTTC GGATGAGTAT CTGGACTGGA TTCTGACGGC ATTGCGAAAT
ATTCCCCATG TTCAGGTCAT ACGTATCGGT ACCCGGATGC CGGTTGTCCT GCCCTATCGC
ATTACCGATG ACCTGGTCGA CATGTTGCGC AAACATCACC CGGTGTGGGT CAATACCCAT
TTCAATCATC CCCGCGAGCT TACGTCCTCG GCGCGGGCGG CTTTGCGCAA ACTGGCGGAT
GCCGGAATTC CCCTGGGCAA CCAGACCGTG TTGCTGGCCG GTGTGAACGA TTGTCCCCGT
ATCATCAAGG AACTGATGCA TCGTCTGGTC GATAACCGTG TGCGTCCCTA TTACCTGTAC
CAGTGCGATC TTTCCGAAGG TCTGATGCAC TTTCGTACAC CGGTCGGGAA AGGCATCGAA
ATCATGGAGA GCCTTATCGG TCATACCAGC GGTTTTGCCA TTCCGACGTA TGTTGTCGAT
GCGCCGGGCG GCGGTGGTAA GATCCCGCTG AATCCGAATT ACCTGGTTTC GTTGTCGACC
AATAAAGTGA TTTTGCGAAA TTACGAAGGG GTCATCACCA CCTATCAGGA GCCTCATAGT
TACGAGCCGA TTTTTTGTGA TCGTCATTGC TCCGATTGTC ATCTTCAGCT TAAGCTCAAG
GGCGCGGAAG AATGCGAGGC GACCGGTCTC GTCAAGTTGT TGTCGGATCA CGATGATACC
ATCTCCTTGA CACCGGAGGA CAACGAGCGC ATGGAGAGGC GGGGAGATGA CTGA
 
Protein sequence
MTDLSGACYV NPHFNQERRR TILLQNQRKI AKKFGGKDTF TNHWEDWKWH AKHAIQDIDT 
FERITGIKLD PKFRENVALT LEKFPLSITP YYASLIDPED YQNDPVFIQS FPSPHELEVD
PREMADPLAE DKDSPVPGIT HRYPDRVLFH VSNLCAMYCR HCTRKRKVGD QDSIPGREEI
KQGLEYIAEN PQIRDVLLSG GDPLMLSDEY LDWILTALRN IPHVQVIRIG TRMPVVLPYR
ITDDLVDMLR KHHPVWVNTH FNHPRELTSS ARAALRKLAD AGIPLGNQTV LLAGVNDCPR
IIKELMHRLV DNRVRPYYLY QCDLSEGLMH FRTPVGKGIE IMESLIGHTS GFAIPTYVVD
APGGGGKIPL NPNYLVSLST NKVILRNYEG VITTYQEPHS YEPIFCDRHC SDCHLQLKLK
GAEECEATGL VKLLSDHDDT ISLTPEDNER MERRGDD