Gene Pcar_1400 details

Gene Information

• Locus tag: Pcar_1400
• ID: 3723036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1644614
• End bp: 1645258
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637750989
• Product: two component signal transduction response regulator
• Protein accession: YP_356816
• Protein GI: 77919001
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAGG CACAATCGAT TACTGTTTTT ATTGCCGATG ACCATCCTAT TTTGAGGATC 
GGTCTGAGCA TGTATCTTGA ATCGAAGCAG AACATCAAAA TCATAGGCGA AGCCGACAAC 
GGGTTTGATG CGGTCAATGC CATCAATCAA AATCCGCCGG ATGTCGTACT TATGGATGTC 
GATATGCCGG GACTGTCAGG TATTGAAGCT ATCCGCGTGT TGCGTAAAAC CCTGCCGGAC 
ATGAGAATCA TCGTTTTGTC CACCTATACC AAAAAGGAAT ATATTCAGGA GGCCATGATG 
GAAGGGGCCA ACGGGTATGT GGCCAAAAAT ACCAAGATCG ATGAACTGAT CAAGATTATC 
GAAGATTTTG CCGCAGGTCG GGAAAGCCAT TCCCCCTATC TGTTGAACCT CGCGGTGAAA 
TGGCGTCAAC GGCAGGATGA CGGCGGGGCG GAGCACAATC TGACCAAAAC CGAAATCAAG 
GTGCTGAAAC ATATTGCCGA GGGAAAAACC AACAACGAAA TTGCCCAGAT TCAATTCGTC 
AGTATCGAAA CGATCAAAAC CCATGTACAA AGGATTTTTA AAAAGCTTGA AGTCGGTAAT 
CGCATGGAGG CTGTGGCGGT TGCCCGTAAG AAAAATATCA TTTAA 

 

Protein sequence

MSEAQSITVF IADDHPILRI GLSMYLESKQ NIKIIGEADN GFDAVNAINQ NPPDVVLMDV 
DMPGLSGIEA IRVLRKTLPD MRIIVLSTYT KKEYIQEAMM EGANGYVAKN TKIDELIKII 
EDFAAGRESH SPYLLNLAVK WRQRQDDGGA EHNLTKTEIK VLKHIAEGKT NNEIAQIQFV 
SIETIKTHVQ RIFKKLEVGN RMEAVAVARK KNII