| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1390 |
|---|
| Symbol | nhaA |
|---|
| ID | 3723506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1630817 |
|---|
| End bp | 1632007 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637750979 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_356806 |
|---|
| Protein GI | 77918991 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.168803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCC AGACTATCCG TGATTTTTTA AAACTCGAAT CGGCCAGTGG CCTGCTGCTG
ATCGGTGCCA TGCTGCTGGC CGTGCTATGC GCCAACACGC CGCTTTCCTG GCTTTACGAC
GGTTTTCTGC AAACCCGGTT CGAGATCCAT TTCGGAGCGT TGAGCCTTGC CAAACCCCTG
CTGCTATGGA TCAACGACGG CCTGATGGCC ATCTTTTTTC TGCTGGTCGG ACTTGAGGTC
AAACGCGAGA TACTCGAGGG GGAGTTGTCC AGCCTGCCGC AGATAGCATT GCCCGGAATC
GCCGCCGTCG GCGGCATGTT GGTCCCAGCG CTGATCTATA CCGGCATCAA CTGGTCCGCG
CCCGCCACCC TGCAGGGCTG GGCCATCCCG GCAGCCACCG ACATCGCCTT TGCCCTGGGG
GTGATCGCCC TGCTCGGCAA GAACGTACCG GGCCCTCTCA AGCTTTTTCT GCTCACCCTG
GCCATTCTGG ATGACCTGGG AGCGATTGTC ATTATCGCAC TTTTTTATAC CGCCGATCTG
TCCGTCTTAT CGCTGGTGCT GGCGATGATA GCGGTGGCCG GCCTGTTTAT CCTGAATCGT
ACCGGCGTAA CGCACATTGC GGCCTACGTC CTTCTCGGGG TATTTCTGTG GATCTGCGTA
CTTAAATCCG GAGTTCACGC TACCCTCGCG GGGGTAGTTC TGGCCTTCGC CATCCCCTTG
CGCACAAAGG ATCAGGACGG CCATTCTCTG CTGCGCCATC TTGAACATAC CCTGCACCCC
TGGGTTGCCT ACGGCATCCT GCCGATTTTT GCCTTTGCCA ATGCCGGCGT ATCCCTCGCC
GGAATATCAT TTACGGATGT TTTCTCCCCT CTGCCCCTGG GCATAGCCGC CGGACTCTTC
GTCGGCAAAC AGTTCGGTAT CGTTGTCTTC TCCTGGATCG GCGTCAAACT GAGAATGGCC
CGCCTGCCGC AGGGCGTCAG CTGGGGCGAA TTTCACGGCA TGGCGGTATT GTGCGGCATC
GGCTTTACCA TGAGTCTGTT TATCGCAACC CTGGCGTTGG ACGGCAGTCA GGAAACGGCG
GATGCCGCTC GTCTAGGAGT CCTGCTAGGC TCTTTGATGT CGGCGCTCAG CGGCTATTAC
CTGCTGAAAA GGGCTGTTCG AAAACGCGCA CTCAGAGCCG AGGCACCCTG A
|
|---|
| Protein sequence | MTVQTIRDFL KLESASGLLL IGAMLLAVLC ANTPLSWLYD GFLQTRFEIH FGALSLAKPL
LLWINDGLMA IFFLLVGLEV KREILEGELS SLPQIALPGI AAVGGMLVPA LIYTGINWSA
PATLQGWAIP AATDIAFALG VIALLGKNVP GPLKLFLLTL AILDDLGAIV IIALFYTADL
SVLSLVLAMI AVAGLFILNR TGVTHIAAYV LLGVFLWICV LKSGVHATLA GVVLAFAIPL
RTKDQDGHSL LRHLEHTLHP WVAYGILPIF AFANAGVSLA GISFTDVFSP LPLGIAAGLF
VGKQFGIVVF SWIGVKLRMA RLPQGVSWGE FHGMAVLCGI GFTMSLFIAT LALDGSQETA
DAARLGVLLG SLMSALSGYY LLKRAVRKRA LRAEAP
|
|---|
| |