Gene Pcar_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1378 
Symbol 
ID3723494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1617258 
End bp1618235 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content50% 
IMG OID637750968 
Productputative integrase 
Protein accessionYP_356795 
Protein GI77918980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.00372186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAC GGTTACACGC TAATGCCACA ACGACCCCGA AAATCCGACG ATATATCCAA 
GAGTCGGAAA AATCGCACAA GGCTTTAGCT AAAGAACTGG GCATATCCAT TGACACGGTA
CGTCGCTGGC GCAAACGTGA CGATGTTCAC GATCGGTCTC ATACGGCACA CCGACTGAAT
ACAACGATGA CCGAAGCCCA GGAAGCCGTT GTCATCGAGT TGCGTCGCTC TTTGTTGTTG
TCTCTCGATG ATCTCCTGGT CGTCACTCGG GAATTTGTCA ATGCTGACGT CTCTCGTGCG
GGACTTGACC GTTGTTTGCG ACGACATGGG GTATCCCGAT TGGCGGACCT GATCCCGAAA
GAGGAAACGG CCAACAACAA GCCCAAAACA TTTAAAAACT ACGATCCGGG GTTCGTTCAT
GTCGATATCA AATATTTGCC ACAGATGCCG GACGAAACCT CTCGGCGTTA CCTGTTTGTA
GGCATCGACC GTGCTACCCG CTGGGTTTAC CTGGAAGTGT GCAAGAGCAA ATCCGCCCAA
GCCGCAAAGG GCTTTTTGAA TCGCCTGGTA GCCAAAGCGC CATTTGTGAT CAAAAAATTG
CTCACCGACA ACGACAAGGC ATTCACGGAT CGATTTTCCA CTGCTGGAGA GAGAAAGCCA
ACAGGGAATC ATGTATTCGA CAAAACCTGC GTTCAGCATG GTATTGAACA TCGGCTTATT
CCTCCACGCC ACCCTCAGAC CAACGGGATG GTTGAGCGAT TCAACGGTCG CATCAGCGAG
GTTTTGGCAA CAACCCGGTT CGATTCCGCC GAAAATTTGG AGCAGACATT GTTACGTTAT
GGTTATCTAT ACAACCAGCA TATTCCTCAG CGAGCGTTGG GGCATAAAGC TCCCATACAA
GCGCTGAAGG ATTGGCAAAA AAAGAAACCA AAACTTTTCC GTAAACAGGT CAGGAATCAT
GCGGGACCTG ACATGTAA
 
Protein sequence
MTIRLHANAT TTPKIRRYIQ ESEKSHKALA KELGISIDTV RRWRKRDDVH DRSHTAHRLN 
TTMTEAQEAV VIELRRSLLL SLDDLLVVTR EFVNADVSRA GLDRCLRRHG VSRLADLIPK
EETANNKPKT FKNYDPGFVH VDIKYLPQMP DETSRRYLFV GIDRATRWVY LEVCKSKSAQ
AAKGFLNRLV AKAPFVIKKL LTDNDKAFTD RFSTAGERKP TGNHVFDKTC VQHGIEHRLI
PPRHPQTNGM VERFNGRISE VLATTRFDSA ENLEQTLLRY GYLYNQHIPQ RALGHKAPIQ
ALKDWQKKKP KLFRKQVRNH AGPDM