| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1376 |
|---|
| Symbol | fixC |
|---|
| ID | 3723492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1614531 |
|---|
| End bp | 1615685 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637750966 |
|---|
| Product | dehydrogenase, flavoprotein containing |
|---|
| Protein accession | YP_356793 |
|---|
| Protein GI | 77918978 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00000125722 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA AAATTTACGA CGTTGCCGTT GTCGGCGGAG GTCCCGCCGG GACCATGGCG
GCGATCGGGC TGGCCAAGCG CGGCATCGAT GTCTGCATCC TCGACAAGGC CGAACACCCG
CGCTACAAGG TCTGCGGCGG AGGCCTTCTC CACCGCGCCG CGGAACGACT CCCCATCTCT
CCGGAGCCTT TCACCGAGGT TGCGTGCCGT AATGTCGAGC TTAATTTTGG GGGCAGGCAG
GAAGGCTTCG TTGTGCGCAG GGATTTTCCG GTGGTGAGAA TGGTCATGCG GGCCGACCTC
GATGCCGCCC TCTGGGAGGA AGCGGGCCGT TGCGGTGCCC ACTGCCTGTC CGGACCCAAG
GTCTGCGACC TCGAAACCTC CTCCGATTCG GTTCTTCTGA AGACCGACCG CGGAGAGGTC
AGGGCGCGAT TCGTGGTGGG GGCTGACGGC GTCAATAGCG TCGTGGCGCG CAGGGGAGGT
TGGTCTCCCT CACCCCTTGC GATTGCGGCG CTCGAGTGCG AACTTGCCGT CGATGACGGA
ACCTACGGGC GTTTTTGCGA TGCGGCCCGC TTCGACATCG ATCATCCCCG GAGGGGCTAC
TCCTGGATCT TCCCGAAGAA AAATCATCTT TCGGTCGGCC TCTGCAGCAT GGTTCGTCCG
GTCTCGGGGA AGGGGCTGCG GGCAGATTTT CACGCTTACC TGAAAAATCA GGGCATCGTC
CCAAAGGAAC CGGGGGAAAT CCACGCCGCA CTGATCCCGG TTTTCCCCCG TCTTGGGCAG
CTCGCAGACA AAGGGATCCT CTTGACAGGG GATGCCGCGG GACTGGCCGA CCCTCTCACC
GCCGAGGGGC TGACCGCAGC CCTCGAGAGT GGACGGCTCG CTGCCGGAGC GATCGCGGAG
GGTGAGATGA AGCGGGAGAA GGTCCAGGCG ATTTACCGGC AGAAGCTCGC CGAAGGGTTG
CTGGCCGACA TCGAGGTTTC CCGCAAGCTG GCCGTACTGC TTTATCACCA CCCGCACCTG
CGGAACCTGA TCTTCCGTTT TTACGGCCAG GCTTTCGTGG AAAAAATGAC CGACATTATG
ACCGGCAAGC GGAACTTCCG GAGCGTCAAT CTGTCGCCGT CTTCCTTTCT GAAACTTGCG
AAGTTCTGGA GATAA
|
|---|
| Protein sequence | MDQKIYDVAV VGGGPAGTMA AIGLAKRGID VCILDKAEHP RYKVCGGGLL HRAAERLPIS
PEPFTEVACR NVELNFGGRQ EGFVVRRDFP VVRMVMRADL DAALWEEAGR CGAHCLSGPK
VCDLETSSDS VLLKTDRGEV RARFVVGADG VNSVVARRGG WSPSPLAIAA LECELAVDDG
TYGRFCDAAR FDIDHPRRGY SWIFPKKNHL SVGLCSMVRP VSGKGLRADF HAYLKNQGIV
PKEPGEIHAA LIPVFPRLGQ LADKGILLTG DAAGLADPLT AEGLTAALES GRLAAGAIAE
GEMKREKVQA IYRQKLAEGL LADIEVSRKL AVLLYHHPHL RNLIFRFYGQ AFVEKMTDIM
TGKRNFRSVN LSPSSFLKLA KFWR
|
|---|
| |