Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1321 |
Symbol | |
ID | 3723549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1545087 |
End bp | 1545653 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637750912 |
Product | lytic murein transglycosylase, putative |
Protein accession | YP_356740 |
Protein GI | 77918925 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TTCCAGTCAT ATGTTTATTT ATTATGGGAG GGATCTTATC CTTCGATGCC ACTGCCTGCC GGGCGGATAT CTACAGGTAC GTCGACAGCC ATGGCGTCAT GCACTTCACC AACACACCCA CCAATTCCCG ATACAGCTTT TACCTCAAAG AATCTCCGAC CAAACGGCCC GGTCCCAAAA GCCTTGATGA CATCATCGAA AGATACGCCG TTGCCAACCG CCTGGAAAAG GCTCTGGTGC GGGCTGTCAT CAAGGCTGAA AGCGACTACA ATCCCCGTGC CGTGTCCCGC AAGGGGGCAA AAGGCATGAT GCAACTGGTT CCCGAAACGG CCCGGGAAAT GAAGGTCTCC GACCCTTTCG ACCCCGAGGA TAACATCCGT GGAGGCACAC GCTACTTACG CAAAATGCTT GACCTTTTCA ACGGCAATCT CGATTTGGCC CTGGCCGCCT ACAATGCCGG CCCGGGTGCG GTTCGCAGGC ATGGCGGCAT CCCCCCCTAC GCCGAGACCC GTCAATACGT CCAGCGTGTC AAACGTTTCC TTCAATCCTA TCGCTAA
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Protein sequence | MKNFPVICLF IMGGILSFDA TACRADIYRY VDSHGVMHFT NTPTNSRYSF YLKESPTKRP GPKSLDDIIE RYAVANRLEK ALVRAVIKAE SDYNPRAVSR KGAKGMMQLV PETAREMKVS DPFDPEDNIR GGTRYLRKML DLFNGNLDLA LAAYNAGPGA VRRHGGIPPY AETRQYVQRV KRFLQSYR
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