Gene Pcar_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1321 
Symbol 
ID3723549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1545087 
End bp1545653 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID637750912 
Productlytic murein transglycosylase, putative 
Protein accessionYP_356740 
Protein GI77918925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TTCCAGTCAT ATGTTTATTT ATTATGGGAG GGATCTTATC CTTCGATGCC 
ACTGCCTGCC GGGCGGATAT CTACAGGTAC GTCGACAGCC ATGGCGTCAT GCACTTCACC
AACACACCCA CCAATTCCCG ATACAGCTTT TACCTCAAAG AATCTCCGAC CAAACGGCCC
GGTCCCAAAA GCCTTGATGA CATCATCGAA AGATACGCCG TTGCCAACCG CCTGGAAAAG
GCTCTGGTGC GGGCTGTCAT CAAGGCTGAA AGCGACTACA ATCCCCGTGC CGTGTCCCGC
AAGGGGGCAA AAGGCATGAT GCAACTGGTT CCCGAAACGG CCCGGGAAAT GAAGGTCTCC
GACCCTTTCG ACCCCGAGGA TAACATCCGT GGAGGCACAC GCTACTTACG CAAAATGCTT
GACCTTTTCA ACGGCAATCT CGATTTGGCC CTGGCCGCCT ACAATGCCGG CCCGGGTGCG
GTTCGCAGGC ATGGCGGCAT CCCCCCCTAC GCCGAGACCC GTCAATACGT CCAGCGTGTC
AAACGTTTCC TTCAATCCTA TCGCTAA
 
Protein sequence
MKNFPVICLF IMGGILSFDA TACRADIYRY VDSHGVMHFT NTPTNSRYSF YLKESPTKRP 
GPKSLDDIIE RYAVANRLEK ALVRAVIKAE SDYNPRAVSR KGAKGMMQLV PETAREMKVS
DPFDPEDNIR GGTRYLRKML DLFNGNLDLA LAAYNAGPGA VRRHGGIPPY AETRQYVQRV
KRFLQSYR