Gene Pcar_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1298 
Symbol 
ID3723600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1520071 
End bp1520814 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID637750887 
ProductZn-dependent proteases 
Protein accessionYP_356717 
Protein GI77918902 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCTTC GTCCGGTCCT TTGCTACAAG GGACTGTTAA AATCTTTTTT ATTCTGGATG 
AATATGGATC TGTTTTTTCA AAAATTGTCG ATTATCCTGG TGCCGGGTCT GCTGGCCATC
ACCGTGCATG AGGTGGCTCA TGGCTGGGTT GCGGAACGTT TGGGGGATCC GACCGCGCGC
TTGCTCGGTC GCCTGACCCT TAATCCCTTC AAGCATGTCG ATCCTATCGG CACCTTGTTG
CTGTTTTTCA TCGGCTTTGG CTGGGCGCGT CCGGTACCGG TCAACCCCGG CAACCTCAAA
GACCCGCGTC GCAATATGAT GTGGGTAGCT CTTGGCGGTC CGACAGCCAA TCTGGGATTG
GCTTTATTGT CCGCTCTGGT TCTGCGGGGA CTTGGACCTT TGTCGGGTGC GGCGGCGCAT
GGCGGTCTGG CTCTGGTGGT CGATCCTCTG GTGCTGATGG CGGCATTCAG CTTGTATGTC
AACGTCATTC TGATGGTGAT AAATCTTATG CCGATACCGC CGCTGGATGG AGGCCGGGTG
TTGATCGGTC TTTTGCCGGA AAAACCCGCT GCGGCTGTGG CACGGCTCGA GCCTTTCGGG
TTTTTCGCGG TTATCCTTCT GTTCTTTTTC TCGCCGTTGT CGGAACGTGT ACTTTTGCCG
GTAGTGGTGT CTGTGACATC CGTGCTTGCG GGTCCGCAAT GGTTTCTGGT GCAGAAAGTC
TTCGTCATGC TTTTCAGGTC GTAA
 
Protein sequence
MTLRPVLCYK GLLKSFLFWM NMDLFFQKLS IILVPGLLAI TVHEVAHGWV AERLGDPTAR 
LLGRLTLNPF KHVDPIGTLL LFFIGFGWAR PVPVNPGNLK DPRRNMMWVA LGGPTANLGL
ALLSALVLRG LGPLSGAAAH GGLALVVDPL VLMAAFSLYV NVILMVINLM PIPPLDGGRV
LIGLLPEKPA AAVARLEPFG FFAVILLFFF SPLSERVLLP VVVSVTSVLA GPQWFLVQKV
FVMLFRS