| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1263 |
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| Symbol | rfaF |
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| ID | 3723604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1483623 |
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| End bp | 1484654 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637750852 |
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| Product | ADP-heptose--LPS heptosyltransferase II |
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| Protein accession | YP_356682 |
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| Protein GI | 77918867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 93 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACCGA TCGATCCTCA AAACATTCGG CGTATCATGG TGCGATCGAC CAACTGGGTT
GGCGATGCCG TCATGACCAC GCCGGCTATG GCCGATCTTA GGAAGGCCTT TCCCGACGCT
GAAATCGTCG TTGTTGCCAA TCCTCTGGTG GCTCAACTGT TTACCTGGCA CCCCTATTGC
GATCGTGTGC TGGTTTACGA CAAAAAAGGG CCTCACAAAG GGTTTGCCGG ATTGTGGAAA
TTCGCACGGC AACTCAGTAG GGAAAACTTC GATATGGCCG TTTTGCTGCA AAACGCCATC
GAAGCGGCCA TTATGGCTGC TCTGGCCGGC ATACCGCGAC GGGTCGGATA CCGCACCGAT
GCGCGGCGTT TACTTTTAAC CCACGGTGTC GCCGTGGGGG CCGAGCAGAA ACGTTTGCAT
CATACAGAAT ATTACCGTCA TATGCTTGGC CATATCTGCC CGGGGCAGGG TGACGGTCGC
CTGCGTCTTG CGTGCAGCGA GGCGGAGCAG TCCTGGGTAA GGGAGACTCT CGGGGACGAT
CGTTGGGTAG CCATTAATCC CGGTGCCGCT TATGGCTCCG CCAAACGTTG GTTGCCCGAG
CGGTTCGCCG CGGTTGCCGA TGGTCTTGTC GAGGAATTCG GTTTGCGGGT GGTGTTGACC
GGCGGACCCG GCGAGAAGGA AATCGGCCGG GATATCGCGC AGGCCATGCG TGCCCCGGCA
CTGAATCTGA TTGGCGAAAC ATCCGTGCGG CAGTTGATGG CGGTACTGGA GGCCTGTCGG
CTGATGATTA CCAACGATTC GGGGCCTATG CACGTAGCGG CTGCTTTCGA TGTGCCCATC
GTGGCGGTGT TCGGCCCGAC CGATCATACC ACCACTTCAC CCTGGACTCA GGATTGTCGC
ATCGTACGTA AATCCATCGA TTGCGCCCCC TGTCTGCTCC GGCAGTGTCC GACCGATCAT
CGTTGTATGC GGGCCATTTC GCCCGAAGAT GTACTGACCG CTGCACGTCA GCTCCTGGGA
GATGTCTCAT GA
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| Protein sequence | MKPIDPQNIR RIMVRSTNWV GDAVMTTPAM ADLRKAFPDA EIVVVANPLV AQLFTWHPYC
DRVLVYDKKG PHKGFAGLWK FARQLSRENF DMAVLLQNAI EAAIMAALAG IPRRVGYRTD
ARRLLLTHGV AVGAEQKRLH HTEYYRHMLG HICPGQGDGR LRLACSEAEQ SWVRETLGDD
RWVAINPGAA YGSAKRWLPE RFAAVADGLV EEFGLRVVLT GGPGEKEIGR DIAQAMRAPA
LNLIGETSVR QLMAVLEACR LMITNDSGPM HVAAAFDVPI VAVFGPTDHT TTSPWTQDCR
IVRKSIDCAP CLLRQCPTDH RCMRAISPED VLTAARQLLG DVS
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