Gene Pcar_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1236 
Symbollnt 
ID3723655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1450481 
End bp1452001 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content57% 
IMG OID637750825 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_356655 
Protein GI77918840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC GCCTGCCGGA TACCGAGCTG CTTTGGGCTT TTCTCTCCGG GGTATTGCTG 
GCGCTATCGT TTCCGCGGCC CGATATCGCT GCCATGGCCT GGTTGGGCCT GGTGCCTTTG
TTGTTGGTCT GCTCCAGGCG GCCGTTTGCC TGCGGGGTTG CCGCGGGCGT CGGTTTTTTC
GGTCCGGTAC TGTATTGGCT GAATATTGTC ATGACCAGTT ACGGTCAGCT TCCTCCGGTT
CTTTCGGGTG TGGCCTATCT TCTGCTGATC GGCTATCTGG CGTCGTTTTT CGGGGCTGCC
ATCTGGGCGG CCAAGCGTTT TGAGCAACGC CTGGGGCTTT CTCTGGCCCT GACCCTGCCG
ATATTATGGG TTGCTCTCGA GTTTTTGCGC TCCTTCCTGC TTACGGGGTT TCCCTGGGCA
ACTCTGGGGT ATTCCCAGCA GAGTCTTTTG CCCCTGATTC AGTCCGCCGA TCTGTTCGGT
CCCTACGGTC TGAGCTATCT GCTGATCCTG TCCAATGCCA CGCTGGCGCT GTTGATACAG
TTTGTTTGCC GACGCGCATC GAGGCCTTTT CCCTATCTGG CGGTGACTCT TACTTTAGCA
CTGGCAGGCG GTTTCTACGT TTACGGTAAT TATCGGCTGG CACATCATCC CGACCACCGT
CAGGAAACGC TGGCAACCGT TCTGGCGCAG GGCAATATCG ACCAATCCCT GAAGTGGAAT
CCCGCATTTC AGTGGCGTAC CATTGACATT TATAAACGGT TGTCCCTGCA GCATCAGGAG
CAGTCCGCGG AACTGATTGT CTGGCCGGAA AGCGCCGTGC CGTTTTTCTA CCAGCAGCCC
GGTGTCCTTT CCGAACAGGT GCGACAGGTC GCCGCCGGCA GCAAGGCCTG GTTGTTGTTC
GGTAGTCCGG CTTTTGAGGA TATCAACCGG CAGCGTCACT ATCTCAACAG TGCTTTTCTG
CTCTCTCCCG AGGGGGAGGA CCTGGGACGC AGCGATAAGG TACATCTGGT GCCTTTTGGC
GAATATGTGC CGCTGAAGAC TTTTTTGCCT TTCATCGACA AACTTGTTGT AGGCATTGGA
GATTTCAGCC CCGGCAGCGT CAGTCCGCTG CCGATGAACG GGCATAAAAT CGGCGTGCTG
GTCTGTTTCG AGGGGATTTT TCCCGAACTG GCACGCGATT ATGTGCGCCG CGGCAGCGAT
CTGCTGGTGA ATATTACCAA CGACGCCTGG TTCGGTCGTT CCTCCGCTCC TTATCAACAT
CTGGCCATGA CCCGTTTCCG GGCTGTGGAA AACCGCATCT GGCTGGCGCG GGCGGCCAAT
ACCGGCATTT CCGCATTGAT AGCACCTTCC GGCCGGATTA CCTCCCGGAC CCCTTTATTT
GAACGGACAG CCTTGAGCGG CATGGTCGGT CTGGGCGCCG CGCCCACGGT TTACAATCGA
CTCGGCGATG TCTTCCCGGC AGCTTGCGGA TTTGTCAGTC TGGTGTGGTT GTTTCTGGCC
TGGCGACGAG ATAGAAAGTA A
 
Protein sequence
MKLRLPDTEL LWAFLSGVLL ALSFPRPDIA AMAWLGLVPL LLVCSRRPFA CGVAAGVGFF 
GPVLYWLNIV MTSYGQLPPV LSGVAYLLLI GYLASFFGAA IWAAKRFEQR LGLSLALTLP
ILWVALEFLR SFLLTGFPWA TLGYSQQSLL PLIQSADLFG PYGLSYLLIL SNATLALLIQ
FVCRRASRPF PYLAVTLTLA LAGGFYVYGN YRLAHHPDHR QETLATVLAQ GNIDQSLKWN
PAFQWRTIDI YKRLSLQHQE QSAELIVWPE SAVPFFYQQP GVLSEQVRQV AAGSKAWLLF
GSPAFEDINR QRHYLNSAFL LSPEGEDLGR SDKVHLVPFG EYVPLKTFLP FIDKLVVGIG
DFSPGSVSPL PMNGHKIGVL VCFEGIFPEL ARDYVRRGSD LLVNITNDAW FGRSSAPYQH
LAMTRFRAVE NRIWLARAAN TGISALIAPS GRITSRTPLF ERTALSGMVG LGAAPTVYNR
LGDVFPAACG FVSLVWLFLA WRRDRK