| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1225 |
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| Symbol | |
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| ID | 3723644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1435873 |
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| End bp | 1437426 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637750814 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_356644 |
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| Protein GI | 77918829 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.489016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT CAGATTTTGA GAATTCGCCC GCGGGCGAAA AAATAGCGGC CATCGAAAGC
ATCATTCAGG GCCACCTCGA CTTACCCACT CCGCCCAACG TGGTGTTTCG TCTCCTCGAA
GTCGTCAGGA ATGACGAACA TTCCTTTCTG GAAATTGGCA ACATCATCAG CAAAGATCCC
TCTTTGACGG CCAGAATGAT GAAAATCGCC AATTCCTCCC TGTTCGGGTT CGGCGGAAAG
ATTAAAACCA TAGAAAATGC TCTGACGGTT CTCGGCATAA ACGTGACCCG GAATATAGCC
CTGTCGTTTA TGATTATGGA CAGCCTGGCG GCACCTGACA GCGATCTGTT CGACATGGAC
TATTTCTGGA AACGTGCCAT TACCGCAGCC GTGGCCGCCG AGATGTTGGC TTCCCATATC
CGCGGTTCAG GCGCCGATGC TTTTTTGAGT GGCCTCCTGA AGGATATCGG CGTGCTGGTC
ATGTACCAGC GGATGGAGAT GGAATATAAA CAAATCCTTT TGCTGAAAGC TTATGCCGGA
AGCGCGAGCT ATCCGATCGA AAGGGAGCTT CTCGGTTTCG ATCATGGCCA GCTGACCGGC
TTGATGCTTA AACAGTGGGG GCTGCCGGAA AATATTTACC GGCCTATCTT TCATCATCAT
GACGAGGTGC GATACGATTC ACCCCATGGG GATCAGGCGG CCATTTTGCA GTTTGCCGAC
CAGCTGTCCT CTCTTTATCA CGGTGCGGCC GACCCGTCGG TTCTGGAGGA GCTGCATCGA
ACACTTGAGC ATCGCTATGC GCTTGACAGC CAGACGATAC GGCAGTTGGT CGATTCTCTG
GCAGAGAGAA CGGTTGAGAT CCTGAGTTAT TTTGATATCG ATCCGGGCGA GATGAAACCC
CTGTCGCGTC TATTGCAGGA AGCCAATTAC GAGCTCGGGA AGCGCTCGTT GTCCTATGAA
CAGATGGTGG GGGAACTCAG GCAAACTCAG GAAGAATCCC AACAATGCAT CAATAAGCTC
CTTGACGCCA ATAAATCTCT GCGTAAACTT GCCTACCGCG ATGAGTTGAC CGGTCTTTAC
AATCAGCGTT TTTTCCTGAC CGAAATGGAT AAGGAATTGG CCCGGGCCAA ACGCTACGGA
TATTCCTTGT CACTGGTGTT CTTCGACGTC GACTTCTTTA AAAATATCAA TGATACCCAT
GGTCATCTGG CAGGGGATGC CGTATTGCGT CACGTTTCCG CGAAGGTAAC CTCCTGTGTA
CGCAGTTGCG ATACGGTTGT GCGTTACGGT GGAGACGAAT TCGCGATCAT CATGCCTGAA
ACGGATCAAG GCGATTTGGC GATTTTTACC GAGCGCCTGC GATTTGAGGT CGAAAAGATG
CTGGTGCCCA TGAACGGCAA GACCATCGCT GTGACCATAA GCATCGGCGG AACCAGTTTT
GATGGCAGAG ATGAGTCCGT AACTCGATAT GTACTTTTGA ATGTCGCCGA TCAGGCCATT
TATCAGTCAA AAAAATTGGG TCGCAATACC GTTACCATTC AATCCGTTGC CTGA
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| Protein sequence | MDFSDFENSP AGEKIAAIES IIQGHLDLPT PPNVVFRLLE VVRNDEHSFL EIGNIISKDP
SLTARMMKIA NSSLFGFGGK IKTIENALTV LGINVTRNIA LSFMIMDSLA APDSDLFDMD
YFWKRAITAA VAAEMLASHI RGSGADAFLS GLLKDIGVLV MYQRMEMEYK QILLLKAYAG
SASYPIEREL LGFDHGQLTG LMLKQWGLPE NIYRPIFHHH DEVRYDSPHG DQAAILQFAD
QLSSLYHGAA DPSVLEELHR TLEHRYALDS QTIRQLVDSL AERTVEILSY FDIDPGEMKP
LSRLLQEANY ELGKRSLSYE QMVGELRQTQ EESQQCINKL LDANKSLRKL AYRDELTGLY
NQRFFLTEMD KELARAKRYG YSLSLVFFDV DFFKNINDTH GHLAGDAVLR HVSAKVTSCV
RSCDTVVRYG GDEFAIIMPE TDQGDLAIFT ERLRFEVEKM LVPMNGKTIA VTISIGGTSF
DGRDESVTRY VLLNVADQAI YQSKKLGRNT VTIQSVA
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