| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1222 |
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| Symbol | dnaE |
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| ID | 3723680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1430419 |
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| End bp | 1433889 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637750811 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_356641 |
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| Protein GI | 77918826 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 69 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG TGCCTTTTGT ACACCTCCAC GTTCACACCC AATACAGCCT TCTCGATGGC
GCCATTCGCA TAGGTGACCT GATCAAACGT GCCGAAGACT GCGGTATGCC GGCCGTCGCC
ATTACCGATC ATGGCAATAT GTTCGGTGCC GTCGAATTTT TCAGCAAACT CAAAAAAAGC
TCCGTTAAGC CGATTGTCGG TTGCGAAGTC TATGTTGCGC CCGGTTCCCG GTTTGAGAAG
AGCAATGTGC GTGGCGGCGA CAAAGCCTAC CATCTGGTGC TTTTGTGTCA GGATATCGAA
GGATACCAGA ATCTCTGCCG GATGGTTTCA GCCGGTTACC GCGAAGGTTT TTACTATAAG
CCGCGTATCG ACTGGGACCT GCTGCGTAAA TACAATAAAG GCTTGATTGC GCTGACGGCC
TGCCTGGGCG GGGAGCTTCC CTCGCTGTTG ATGCAGGGCA AACACGAGCA GGCCGTGGCC
CGCGCCCGTG ATATGGCCGC CATATTCGAT GAGAATCGTC TGTATCTCGA ATTGCAGGAG
AACTTCATCG CTGAGCAGAA GCCCGTCAAT GAGGGTCTTA TCGCTATCGG CAAAGAGTTG
GGACTGCCCC TGGTTGCCAC CAACGATTGT CATTATCTGA CCCGCGAGTC CGCTGCCGCC
CATGAAGTTT TGCTGTGCGT GCAGACCGGC AAGACCATGG ATGATCCGGA CCGCTTTCGG
TTTTCCAATG ACGAGTTCTA TCTCAAAACG CCTGAAGAGA TGGCCGAACT CTTTCATTAT
GCACCCGAGG CCCTGGCCAA TACCGTTGCG ATTGCCGATC GCTGTAACCT GGAACTCGAT
TTCGATACCT ACCATTTTCC CCAGTACGAA AAACCGGCCG AAAAGACCCT CGATCAGGTG
CTGGAAGAGG ATTCCTGGCG CGGTCTGGAA GAGCGCCTGG CCGAAATCCG CAAGGTTCGT
CCCGATTTTT CCGCCGAAGA GGAAAAAGTC TACCACGACC GGTTGGTACG GGAACTCGAA
TGTATCAACA GCATGGGGTT CCCGGGTTAT TTCCTGATCG TGGCCGATTT TATCAACTGG
GCCAAGGATA ACGGGATCCC CGTCGGTCCC GGTCGCGGCA GTGCCGCCGG TTCGCTGGTA
GCTTACGCCA TTCGCATCAC CGATATCGAT CCCATTCCCT ATAATCTGCT GTTTGAACGT
TTTCTGAACC CCGAGCGCGT CTCGATGCCT GATATCGACG TCGATTTCTG CATCTACGGG
CGGGAAGATG TTATCGAATA CGTGCGGCAG AAGTACGGCG AGGAAAACGT CGCCCAGATT
ATCACCTTCG GTACCATGAT GGCCAAGGGG GTGATCCGTG ATGTGGGGCG GGCCCTCAAT
ATGTCCTACG GCGATGTCGA TCGAATCGCC AAGCTCGTAC CCACGGTGCT CAATATCACC
CTCAAGGAAG CCCTGGAACA GGAACCGCGT CTGCAGGAAT TGCAGGACAA GGATCCCCAG
GTCAAACAAC TTCTCGATAT CGCCCTTACG CTGGAAGGTC TGACCCGGCA TGCGTCCACC
CATGCCGCCG GCGTGGTGGT TACCCCCAAG CCGTTGTCCG AATATCTGCC GTTGTACACC
GATCCGAAAT CGGGCGGCCA GGTTACCCAG TTCCCCATGA AATACGTGGA GCAGATCGGG
CTGGTCAAGT TCGACTTCCT CGGTTTGAAG ACGCTGACCG TTATCGCCAA CGCGGTACGG
CTGATTCATG AGGGCAATGA TCCGGAATTT GACCTGAAAC TGGTGGGGGA CGATGATCCC
GATACCTATC GGTTGCTGTC GGCCGGTGAA ACCACGGGCG TGTTTCAGCT CGAGTCTTCC
GGTATGAAGG AACTGCTGGT CAAGCTCAAA CCGAGTTGTT TCGAGGATAT TATCGCCGTC
TGCGCCCTTT ATCGTCCGGG GCCGCTTGGA TCGGGCATGG TCGACGATTT CATTCTGCGC
AAACACGGCA AAAAGGAGAT CACCTACGAC TTTCCGCAAC TCGAGCCGAT TCTGAAAGAC
ACCTATGGCG TTATCGTCTA TCAGGAACAG GTCATGCTGA TCGCCCAGGT GCTGGCACGC
TATTCCCTGG GAGGCGCCGA CTTGCTGCGC CGGGCCATGG GTAAGAAAAA ACCCGAGGAG
ATGGCCAAGC AAAAAGAGAT TTTCATGTCC GGCGCCCGGG AGAACGAACT CGATGTCAAA
AAGGCCGAGG CGGTCTTCGA TCTCATGGAA AAATTCGCCG CGTACGGTTT TAACAAATCG
CATTCGGCGG CGTATGCCCT GGTCGCTTAT CATACGGCGT ATCTGAAGAC CCATTATCCG
GTGGAATTCA TGGCTGCTCT GCTGACAGAG GACATGGAAA ACACCGAAAA GGTCATCAAG
AACATCAACG AAGTACGCTC TATGGGTATC GAGGTGCTGC CTCCGGACAT CAATGCTTCG
AGCAGTTCCT TCACCGTACA CGACAATGCC ATACGGTTCG GACTCGGCGC CGTCAAGGGC
GTCGGCGGAG CGGCTATCGA CGCGATACTC GAGGTTCGCC AGGAGCAGCC CTTCACCACT
TTGCACGAAT TCTGCGAGCG GGTCGATTTA CGCAAGGTCA ACAAAAAAGT CGTCGAAGCG
TTGATCAAGT GCGGAGCTTT CGATTCTTTG GGCGGTCATC GCGCCCAGTA CCTGGTGGTG
CTGGAAGAGG CCATGGAAAT CGGCCAGAAG GTGCAGCGCG AAAAGGCGGA GGGGCAGGCA
TCCCTGTTCG GTACCGATGA GATTGTATCT CAGCGGGGCA CCAGCTATGG GGTTTTGCCC
GAAATGGAGG AATGGTCCGA TAAAGTCAAG CTCGGGTTCG AAAAAGAGTC ACTGGGGTTC
TATATCACCG GCCATCCCCT GGGACGCTAT CAGGAGGTCA TACGGCGTTT CGCCAATTGT
ACCACCGCCG ACGTTGCTGA ACGGGCCGAC AAGGAAGAGG TGCGATTGTG CGGCATGGTC
AGCGGCATCA AGGATCTGGT GACCAAAAAG GGCGAACGCA TGGCTTTTGT GACCCTGGAG
GATCTCAGCG GCTTCGTGGA AATGGTGGTA TTTCCCGATA TCTATCGCGA CGCTTCGGAC
TCTCTGCACA GCGATCAGCC GCTGCTGGTG ACCGGGACGG TGGAAGTTGC AGAGGAAACA
CGCAAACTGA TGCCGAAAGA AATCCTGCCT CTGGCGGAGG TCAGCCGCAA GGAAACCAAA
CGGGTGCACT TCAGGTTTCA GGTTCCGGGG CTCGTCGACG ATCAACTGCA TCGTCTCAAG
GAGATCATAA TGCGTCATCG GGGCGCTTGC CCGGTGCTCA TGCACCTGGT GATTCCCCAT
CGCAGCGAGA CCGTTCTGCG GTTGCCCGAA AGTCTGAAAA TTGCCCCTAC CGATGAAATG
ATGGAAGACA CCGAGCGCCT GTTTGGGTAC AATGTGATAA CTTTCGAATA A
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| Protein sequence | MEKVPFVHLH VHTQYSLLDG AIRIGDLIKR AEDCGMPAVA ITDHGNMFGA VEFFSKLKKS
SVKPIVGCEV YVAPGSRFEK SNVRGGDKAY HLVLLCQDIE GYQNLCRMVS AGYREGFYYK
PRIDWDLLRK YNKGLIALTA CLGGELPSLL MQGKHEQAVA RARDMAAIFD ENRLYLELQE
NFIAEQKPVN EGLIAIGKEL GLPLVATNDC HYLTRESAAA HEVLLCVQTG KTMDDPDRFR
FSNDEFYLKT PEEMAELFHY APEALANTVA IADRCNLELD FDTYHFPQYE KPAEKTLDQV
LEEDSWRGLE ERLAEIRKVR PDFSAEEEKV YHDRLVRELE CINSMGFPGY FLIVADFINW
AKDNGIPVGP GRGSAAGSLV AYAIRITDID PIPYNLLFER FLNPERVSMP DIDVDFCIYG
REDVIEYVRQ KYGEENVAQI ITFGTMMAKG VIRDVGRALN MSYGDVDRIA KLVPTVLNIT
LKEALEQEPR LQELQDKDPQ VKQLLDIALT LEGLTRHAST HAAGVVVTPK PLSEYLPLYT
DPKSGGQVTQ FPMKYVEQIG LVKFDFLGLK TLTVIANAVR LIHEGNDPEF DLKLVGDDDP
DTYRLLSAGE TTGVFQLESS GMKELLVKLK PSCFEDIIAV CALYRPGPLG SGMVDDFILR
KHGKKEITYD FPQLEPILKD TYGVIVYQEQ VMLIAQVLAR YSLGGADLLR RAMGKKKPEE
MAKQKEIFMS GARENELDVK KAEAVFDLME KFAAYGFNKS HSAAYALVAY HTAYLKTHYP
VEFMAALLTE DMENTEKVIK NINEVRSMGI EVLPPDINAS SSSFTVHDNA IRFGLGAVKG
VGGAAIDAIL EVRQEQPFTT LHEFCERVDL RKVNKKVVEA LIKCGAFDSL GGHRAQYLVV
LEEAMEIGQK VQREKAEGQA SLFGTDEIVS QRGTSYGVLP EMEEWSDKVK LGFEKESLGF
YITGHPLGRY QEVIRRFANC TTADVAERAD KEEVRLCGMV SGIKDLVTKK GERMAFVTLE
DLSGFVEMVV FPDIYRDASD SLHSDQPLLV TGTVEVAEET RKLMPKEILP LAEVSRKETK
RVHFRFQVPG LVDDQLHRLK EIIMRHRGAC PVLMHLVIPH RSETVLRLPE SLKIAPTDEM
MEDTERLFGY NVITFE
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