| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1174 |
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| Symbol | |
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| ID | 3723710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1369421 |
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| End bp | 1370716 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637750763 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_356593 |
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| Protein GI | 77918778 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 74 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATA TCGACTATAA GGAATGTGAG GTTTTTTCAC CCTCCTCATC TGATACGCGC
TTCAAGATCG AATTAAACAA AGTTCCTATT GAATGGGATT TGGAAAACGG GAGTTTTACT
TTTTTTGGGC TTGATTCGGC TCTTTTCTGG ACAGACCCCT CTCTGGTTCG GGTTTTTGCG
CCGCTTGCTG ACGAGGTTGG CAGGGATCTC TTCCGGCTAC TTGTGGCTCA TTCATCCAGC
CTGGGCACGA AAGAAGATTA TCACTCGATG ATAGGAAGTC TGGGTGATGG TTTTGCCGAG
GGTTTTTTGG CCTGGGGAAA GGCGGTCTCC ACGGCGGGTT GGGGTGTCTT TGAGATGCCC
ACATATGACC CGGTTGCCAA GGTAGCAACA GTGATTGTTA GAAACCCGGT TGAATTAAAA
ATCCAACGGA ACCTACCCCC AGAAAAACGC TGGGGCTGTC CATCTTTGCA AGGCAAGATT
ATTGGGATAT TCAACCATGC GTTCAGCGAA CACTGCTGGG CAGATGACAT CTGTTATTAC
GATGCGGATA CTCCCTACGT CGTTTATCAA ATCTACGGTT CTAAAAAAAC TATTTCAGAG
GAATTAAAAA ATTTACGAAA GGAGCGAATG CTCTCTAGGG AGCGCGCCTT AACTTGTGAA
GTAGAACGCA AAACTGAGGA ACTCAGGCGG TCTAAGGAAG CCCTCGAGGA CTATTCAAGG
ACATTGGAAG AGAAAGTTGC AGCCCGTACC TCCGAGCTTG AAACGATACT TGGGTTGCTT
ATGGCGGAAA AAGAAAAATT CAAGTCCCTA GCTGAAATCG ATCCCCTGAC CGGACTCTAC
AACCGACGTG CATTCTTCGG TCTTAGCGGG GAAATCTTAA AAAAGTATAG CGAGCTAGAC
CGGCCTATTA CGGTCATCAT GCTGGACGTT GATTCCTTTA AACAAATCAA CGATGTCTAT
GGCCATTCGG TGGGAGACCA GGTGCTGGTA GCCCTGTCAG ATCTGATAAA AAAAACATTC
AGGGGGTCGG ATGTCATCGG TCGTATTGGT GGTGAAGAGT TTGCCATTTT ATGCCCCAAT
TCCGATTTTG TAAAAGATCG GGCGCCGTTA GAAAACCTGA GAAAAGAGAT CGAGGGGTTT
CAAATTTCAG CTGAAGGCCA TGAAATCAAG GTTACAGTCA GTATCGGTGC AACTACCGGC
AAGAAAACTG ACGACCTGGG CGCACTTATC AAACAAGCAG ACAAGATGTT GTACAGGGCC
AAGGAGTCTG GGCGAAATTG CATTGTGTCC TCTTAG
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| Protein sequence | MDNIDYKECE VFSPSSSDTR FKIELNKVPI EWDLENGSFT FFGLDSALFW TDPSLVRVFA
PLADEVGRDL FRLLVAHSSS LGTKEDYHSM IGSLGDGFAE GFLAWGKAVS TAGWGVFEMP
TYDPVAKVAT VIVRNPVELK IQRNLPPEKR WGCPSLQGKI IGIFNHAFSE HCWADDICYY
DADTPYVVYQ IYGSKKTISE ELKNLRKERM LSRERALTCE VERKTEELRR SKEALEDYSR
TLEEKVAART SELETILGLL MAEKEKFKSL AEIDPLTGLY NRRAFFGLSG EILKKYSELD
RPITVIMLDV DSFKQINDVY GHSVGDQVLV ALSDLIKKTF RGSDVIGRIG GEEFAILCPN
SDFVKDRAPL ENLRKEIEGF QISAEGHEIK VTVSIGATTG KKTDDLGALI KQADKMLYRA
KESGRNCIVS S
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