Gene Pcar_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1161 
SymbolflhF 
ID3723736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1356891 
End bp1358150 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID637750751 
Productflagellar GTP-binding protein 
Protein accessionYP_356580 
Protein GI77918765 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTA GAGTTTTTGA AGCCGAAACC ATGCCCCTGG CCCTGAAAAA GGTCAAGGAG 
GCTCTGGGCC CGGACGCGCT GATCCTGTCC ACCCGGACGG TGCGCAAAAG CGGTCTGGGG
GTCTTTCGCA AACCGATTTG CGAAGTAACG GCCGCTATCG ACACCGTCGA GCCGGAAGCG
GACACAGCAG CCCCCCAAAC GCCCCCACCC AACGCCGGCA AGACGGAGGA GCAGGACGAA
CTGACGTATC AGGACCTCTG GCAAAAAACC CGGCCAGGCG CCGAAGCCGC TTATCAACCG
CATATTTACG GAACCGAGCG GCCCAAGGAT GATCTCAAGG ATGTCCGCAA CGAAATCGAC
GAGCTCAAGG CCCTGGTCAA ACAACTGGCC AAACCCGCCG AACCGGCGTC GCCTCCGCCA
ATTGTCGCCG CGCCGCCCCG AAAAGTACAG CAAGGTGCGG AAGTCCAGGA AATGGCCCTG
CTGCACAACG AACTTGATCG CCTCGGCATC TGTGGCGAAG CGGCAGCCAG CCTGGAACAA
TATGCCTGGG ACAAGCTCTC CCCCCGGCAA CTCGGGGATC CGCAAGGTAT CCGGGAATTT
CTTGTCGATG CCATTGCCAG GCTGATTACC GTCTATGGTC CGTTGCAGAC GGAACCCCGG
CGGCAAAAAC GTATTGCCCT GGTTGGCCCC ACCGGGGTGG GCAAGACCAC CACTATCGCC
AAAATGGCGG CCAAACAGTT GCTGAACGGA ACCGGACGGG TCGCTCTGGT CACCATTGAC
ACCTATCGCA TCGCCGCCGT GGAGCAACTC AAGGTGTATG GGGAAATCAT GAATCTGCCG
GTCGAAGTGG TCACCACGCC GGAGCAGTTG CATCAGGCCC TGGCACGCCA CCAGGACAAG
GAACTGATCC TCATCGACAC CGCCGGCCGC AGTCCCCGGG ACGACATGAG CATTGCCGAG
CTGGCGGCGT TCCTGGGAAA AGCCGAAACG GAGAACCTCC TGGTTCTGTC CGCCACCACC
CGCGACCGGG AGCTGACCGA AGCCGTGCAG CGCTTCAGCC GCATCCCGCT GCACAGCCTG
GTTTTCACCA AACTGGACGA GTGTGAACAG TGTGGCACCC TGCTTAACAT TTCGCTGACT
CAGCAGCTGC CGTTGTCTTT CCTCACCAAT GGACAACGGG TGCCGGAAGA CTTAGTGGAA
GCTGACACCG AAGCTATTAC CGGCTTTATT ACCGGCAGTT ATCGAGAGAA GGCCGTATGA
 
Protein sequence
MLVRVFEAET MPLALKKVKE ALGPDALILS TRTVRKSGLG VFRKPICEVT AAIDTVEPEA 
DTAAPQTPPP NAGKTEEQDE LTYQDLWQKT RPGAEAAYQP HIYGTERPKD DLKDVRNEID
ELKALVKQLA KPAEPASPPP IVAAPPRKVQ QGAEVQEMAL LHNELDRLGI CGEAAASLEQ
YAWDKLSPRQ LGDPQGIREF LVDAIARLIT VYGPLQTEPR RQKRIALVGP TGVGKTTTIA
KMAAKQLLNG TGRVALVTID TYRIAAVEQL KVYGEIMNLP VEVVTTPEQL HQALARHQDK
ELILIDTAGR SPRDDMSIAE LAAFLGKAET ENLLVLSATT RDRELTEAVQ RFSRIPLHSL
VFTKLDECEQ CGTLLNISLT QQLPLSFLTN GQRVPEDLVE ADTEAITGFI TGSYREKAV