| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1159 |
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| Symbol | fliA |
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| ID | 3723734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1355216 |
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| End bp | 1355983 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637750749 |
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| Product | flagellar biosynthesis protein, alternative sigma factor 28 |
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| Protein accession | YP_356578 |
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| Protein GI | 77918763 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 69 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCTG GTCCCGCTTA CGCCCCTATC AGAGCAGACG AAAAAGATCG CCTGATCAAG
AGCCATCTGC ACATGGTCAG TTTTCTTGCC GAGCGCATGG TGAGTCAGGT GCCGGCCTTT
ATGACCCGTG AGGACATTTC CAGTGCCGCC ATGGTAGGTC TGGTCGATGC CGCCAACCGC
TTCAAGCCCA GCATGGGCGT ATTGTTCAAG ACCTTTGCCG AAAAGCGCAT GCGCGGCGCG
GTTCTGGACG AGGTACGCCG CATGGACTGG TTTTCCCGCA GTCTGCGCCA GAAACAATCC
CGCATCGCCA AGACCATGGA GGCGCTGGAA AAACGCCTCG GCCGCCCACC GGAAGAACAC
GAGATGGCCG CGGAACTCGA AATGGATCTG GAAAGTTACC GCCAGGCACT TGGGGAGGTC
AGTTACCTCG GTTGCGTCAG CCTGCACGAA ACCATCGAGG ACACCCCCGA CGGACCGACC
ATGCTGGACA ATATCGAGGA CCAGAACAGT CCCAGTGCCG TCGAAATGCT CGAAAACAGC
GAACTGACGC AGGAGCTGGC CCGCCAGATC GACCGACTGA CGGATAAGGA ACGTCTGGTG
GTCTCCCTCT ACTACTATGA GGAATTAAGC CAGAAGGAGA TTGCCGAAGT ACTGGAACTG
TCGGAGGGCC GCGTGTCCCA ATTGCACAGT CAGGCCCTGA TCAAACTCAA GACCTCCATC
AAACGGTCAC AACGCACAGG AGCCGGGCAG GCTTTCCCTG CCCGCTGA
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| Protein sequence | MNPGPAYAPI RADEKDRLIK SHLHMVSFLA ERMVSQVPAF MTREDISSAA MVGLVDAANR
FKPSMGVLFK TFAEKRMRGA VLDEVRRMDW FSRSLRQKQS RIAKTMEALE KRLGRPPEEH
EMAAELEMDL ESYRQALGEV SYLGCVSLHE TIEDTPDGPT MLDNIEDQNS PSAVEMLENS
ELTQELARQI DRLTDKERLV VSLYYYEELS QKEIAEVLEL SEGRVSQLHS QALIKLKTSI
KRSQRTGAGQ AFPAR
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