| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1141 |
|---|
| Symbol | |
|---|
| ID | 3723755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1338374 |
|---|
| End bp | 1339513 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637750731 |
|---|
| Product | pyridoxal-phosphate-dependent aminotransferase enzyme |
|---|
| Protein accession | YP_356560 |
|---|
| Protein GI | 77918745 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 90 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACCCAA AATTCATCCC CTATGGCCGC CAGCAACTAG AACCGGACGA TATCGAAGCC
GTTATCGATG TGTTGCGTTC CGACTGGCTG ACGACGGGAC CGCAAGTCGA ACGCTTCGAA
GCCATGCTGG CGGAAACAGC GGGCACGGAT TACGCCGTGT CCGTAAGCAA CGGTACCGCC
GCGCTGCATA CGGCGATGCA TGCCATCGGT ATCGGCGAGG GGGATGAAAT CATCGTCCCG
CCCCTGACGT TTGCCGCAAC GGTCAATGCG GTGCTCTACC AGGGTGGTAC CCCCGTGTTT
GCCGATGTGG ATCCGCAGAC CCTGCTTATC GACCCCGCCT CGGTGGAATC CCGCATTACG
GCCCGTACCA GAGCCATCGT TGCCGTCGAC TATGCCGGAC AGCCCTGCGA CTACGATACA
TTGCGCCAAA TCGCTTCGCA CCATGGACTT TATCTCATCA GCGATGCCTG CCATTCCCTC
GGAGCCGCAT GGCGTGGCAA ACCGTGCGGT TCCTTGGCTG ACCTGACGGT GTTCAGCTTT
CATCCGGTAA AACCGATCAC CTCCGGTGAA GGGGGGGCCA TCGTTACCGG CGATGAGGTT
CTCGCCCGTC GCATGCGAAC CTTCCGCAAC CATGGCATCA CCACCGATCA CGGCCAAAGG
GCCAAAACGG GCAGCTGGCA TTACGACATG GTGGAACTGG GATTCAATTA CCGGCTCACC
GACATCCAAT GCGCCCTCGG TATTTCGCAA CTGGCAAAAC TGCCGGAGTT CATCGGACAC
CGCCGCCGTA TAGCCCGCAA TTACGATGAA GCTTTTGCCC CTTCCCCCCG GATTCAGCCC
CTCGGTGTGC ACCCGGAAGC CCGGCACGGA TATCATCTTT ACGTGGTACG CGTACCCGAA
CGTGACAGGA TTTTCGGTGC CCTGAGGCAG GCCGCCATCG GCGCCAACGT CCATTACATT
CCGGTGCATT TGCATCCCTA CTACCGTCAA CGTTTCGGTA CCGGTGAAGG GTTATGCCCC
ATCGCCGAAG CGGCCTATGC CGAAATCCTG TCATTACCGA TTTTCCCCGG CTTAAGCGTC
GCGGATCAAA ACCGCGTCAT AGACACATTG CACGAAGCTG TCGGCAAGGA GAAACCATGA
|
|---|
| Protein sequence | MDPKFIPYGR QQLEPDDIEA VIDVLRSDWL TTGPQVERFE AMLAETAGTD YAVSVSNGTA
ALHTAMHAIG IGEGDEIIVP PLTFAATVNA VLYQGGTPVF ADVDPQTLLI DPASVESRIT
ARTRAIVAVD YAGQPCDYDT LRQIASHHGL YLISDACHSL GAAWRGKPCG SLADLTVFSF
HPVKPITSGE GGAIVTGDEV LARRMRTFRN HGITTDHGQR AKTGSWHYDM VELGFNYRLT
DIQCALGISQ LAKLPEFIGH RRRIARNYDE AFAPSPRIQP LGVHPEARHG YHLYVVRVPE
RDRIFGALRQ AAIGANVHYI PVHLHPYYRQ RFGTGEGLCP IAEAAYAEIL SLPIFPGLSV
ADQNRVIDTL HEAVGKEKP
|
|---|
| |