| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1103 |
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| Symbol | |
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| ID | 3723888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1299067 |
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| End bp | 1301247 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637750693 |
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| Product | recombination factor protein RarA/unknown domain fusion protein |
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| Protein accession | YP_356522 |
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| Protein GI | 77918707 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000432194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTT TTTCCCAAGC GTCTTCGTTC TCCTCAGAAC CTCTGGCATC CAGAATGCGC
CCCCGCACTC TGGAAGAGTA CGTGGGACAA GACCATATTC TCGGAGAAGG TCGGCTTTTG
CGCCGTGCCA TTCGGGCAGA TCAGCTTTCA TCCTTGATCT TTTACGGCCC TCCCGGTACC
GGGAAAACTA CGCTGGCCCA GGTGATTGCC AATAGCACCG CCAGCCGTTT TGTGTCGATG
AATGCTGTTC TCAGCGGTGT GAAAGATTTG CGGGAAGCCA TTGAAGATGC TCGGCAATCT
CAGGAATATT ACGACAAACG CACCATCTTG TTTGTCGATG AAGTTCATCG GTGGAATAAA
TCCCAGCAGG ATGCACTGCT GCCCTGGGTG GAAAAGGGCA CCATTATTCT GATCGGAGCC
ACGACGGAAA ACCCCTATTT TGAAGTGAAT AAAGCACTGG TCAGTCGCAG CCGGGTTTTC
CAGCTTCTGG GACTGACCGA AGAAAATCTC CGGCAGATCG TTACACAGAC CCTGCAGGAT
AAACAACGGG GTTACGGGAA ATGGCAGGTG GAGTTCGAGC CCGATGCGCT GGACCACTTG
GTACGGGTAG CCTCGGGAGA TGCCCGGTCA CTCCTGAATG CTTTACAGTT GGCCGTGGAA
ACGACCCCTG AAAGTTTCCC CCCTCCGGCA AACAGCCGGA TACATATCAC CCTTTCGGCT
GCCGAAGAGA GTATCCAGCA GAAAGCCGTT CTCTACGATA AAGAAGGGGA TTACCATTTC
GATACCATCA GTGCCTTTAT AAAATCCCTT AGGGGATCCG ATCCCGACGC AGCCCTCTAC
TGGATGGCGC GTATGGTAAG GGCCGGCGAA GATCCCCGGT ATATTTTCAG AAGGATGCTG
ATATCGGCCA GCGAAGATGT CGGTATGGCC GATCCCTACG CATTAGGGGT CGTGGAAGCG
GCCGCATCAG CTTTTGACCG GGTAGGTCTG CCGGAAGGGC AATTTCATCT TACCCAGGCA
ACCTTGTATC TGGCGACCTG TCCCAAATCC AACTCATCTC TGGCTTTTTT CGACGCCCTG
GAGGCGGTAG CAAAAGAAGA GGCTGAGGTT CCCAATCATC TCCGGGATTC CAGCCGGGAC
GAACATAGCT TCGGCCATGG CAAAGGTTAC AAATATCCCC ATGCCTTCCG GGATCACTGG
GTCGCCCAGC AATACCTGCC CGGAACCCTG AAGGGCCGGA TTTTCTATCA GCCCACGGGT
CAGGGATATG AGGGGAGCAT TCAGACTCAG GTTATCCGGC ACCGTGAAGA ACAACTGGAC
CGGATGTTGG AGGAGACCCC GGAAACCCTA AGCTTCTCAC CGGGAGATAA AGAGCGGGAC
CGGTGGATTC GCCGTGTACA GGGAACGTCA TCTTCCCGCA AAAAGCTGCT GAAAGCCTTG
GTCGAACCGA TGCAGATAGG GCGTTCCGAC CGCATATTCC TGGCCCCACT CCGATGGAAC
CAGCTCTTCT GGGAACTGTT CCGCAAGGTA CCGGAAGGAG GACTCACTGC TTTAGCCGAC
CAGGAGGACT ACCGTAATCT CGTGGAGTTC TCCATGGAAA GTCTCCCTGA ATCGGAACGG
CCCCTCCTGG TTGACCGCTC TCTTAAAGAT CCTCGATGGC TGGAGCATCC GGATCTTCAA
CCGCTGACAT GGGAGCACAT TGTTCTGGAC GGGGTACTGG ATCAGCAGGA CGAACTTTTT
CCTCAGATTC TGGAAGAAAA ATTAGCGCCC AAAGGGTGGT TTACCGGCTG TCTGCCCCTT
CCCGGAGCTG GCAGCCGATT AAGCGAATTA CTAAAAGGCC GGGTAGAAGA CAAACTCTTA
TCTCGGATAG AAGAAGGGGA GGAACTATTT TATACCGAAA GAGCACCTTA CCCCCAAAAA
GAACGTATGG AAAACCTGGC TGATTTGACA TTGGTTGAGT GGACTCAGTT GCCCATCGAA
GAATCCCTGG TGCCCAATGC CCAGTGGCTT GCCCCCTGGT TCAAAGATCT ACCCGGTAGT
TGGTTTAATT ATGTCAGTCG CAACCTGGGT GAAGATGAGA TCAGGAGAAT TCGAGCCCTT
TTACAACCGG AAAAACTTCC CTCCTCCTTT CCGTGGACCC GCAATTGGCT TATTTACCGC
CTTCGGAAAT CCGCAACATA A
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| Protein sequence | MNLFSQASSF SSEPLASRMR PRTLEEYVGQ DHILGEGRLL RRAIRADQLS SLIFYGPPGT
GKTTLAQVIA NSTASRFVSM NAVLSGVKDL REAIEDARQS QEYYDKRTIL FVDEVHRWNK
SQQDALLPWV EKGTIILIGA TTENPYFEVN KALVSRSRVF QLLGLTEENL RQIVTQTLQD
KQRGYGKWQV EFEPDALDHL VRVASGDARS LLNALQLAVE TTPESFPPPA NSRIHITLSA
AEESIQQKAV LYDKEGDYHF DTISAFIKSL RGSDPDAALY WMARMVRAGE DPRYIFRRML
ISASEDVGMA DPYALGVVEA AASAFDRVGL PEGQFHLTQA TLYLATCPKS NSSLAFFDAL
EAVAKEEAEV PNHLRDSSRD EHSFGHGKGY KYPHAFRDHW VAQQYLPGTL KGRIFYQPTG
QGYEGSIQTQ VIRHREEQLD RMLEETPETL SFSPGDKERD RWIRRVQGTS SSRKKLLKAL
VEPMQIGRSD RIFLAPLRWN QLFWELFRKV PEGGLTALAD QEDYRNLVEF SMESLPESER
PLLVDRSLKD PRWLEHPDLQ PLTWEHIVLD GVLDQQDELF PQILEEKLAP KGWFTGCLPL
PGAGSRLSEL LKGRVEDKLL SRIEEGEELF YTERAPYPQK ERMENLADLT LVEWTQLPIE
ESLVPNAQWL APWFKDLPGS WFNYVSRNLG EDEIRRIRAL LQPEKLPSSF PWTRNWLIYR
LRKSAT
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