| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1101 |
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| Symbol | |
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| ID | 3723886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1296119 |
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| End bp | 1297531 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637750691 |
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| Product | outer membrane protein |
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| Protein accession | YP_356520 |
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| Protein GI | 77918705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGA TAACAGCTAT TTTCCTATGT ACATTGGTTT TAAGCGGCTG TTCGGTGTTC
CGTGACTACA CACCACCTGA AAACCCGGTC GGTGCGGAGC AGACCGACCT GACGGTGTCC
GATGCGGTGC GCTACAAAGC CGCACAAGAG CCTGTCGCTG CATGGTGGCA GAAGTTCGAC
GATCCGCAAT TGGTGGCACT GGTCGAAGAA GCGCTGGATA CCAACCTCGA TGTCCGTATT
GCCCTGGCCA ATCTCGGAGA GGCCCGCGCC ATGGCCCGGG AGGTCGGTCT CGACCGCTTT
CCGACCGTGA CCGGCAATGC AGCCTATTTC CGCCTTCTGA ACTCCCGGGA AACATCTGCC
GGCAACTCTG TTGAGCGCGA TGTGAACAGC TATACAGCAG GATTCGACGC CCTTTGGGAG
TTGGATCTGT TCGGGCGAGT ATCCCAACGG ATCGCAGCGC AAAAAGCTCT TACGGACGCA
GCACTGAACG ATGTGCGGCA GATATACGTG ACGGTTAGCG CAGAAGCCGC GCGTACCTAT
ATCGAACTGC GCGGGGCCCA ATACCGCCTT AATATTGCCG AACGCAACGC CCGTAACCAG
GCCGGCACCT ATGAACTGAC GCAGAAACTT TTCGATGGCG GACGCGGCAC GGCACTGGAC
GTATCCCGGG CCATAACGCA ACGTGATCTG GCCCGCTCCC GCATCCCCCC GTTACAGGCC
GAGGTGACAG CCGCCATAAA TCGGCTCTCC GTTTTGACCG GTCGTGTTCC GGATGCCTTA
CTCGAAGCGT TGTCGGGCAG CAAACCGTTG CCGAGCCTGC CCGTGACGGT CGCCGTCGGC
GATGCAGAAG GGCTTCTCAA GAGGCGCCCG GATATTCGCA CGGCCGAACG GCAACTGGCC
GCCAGCGTGG CGCGGTATAA CGTGGCGGCA ACCGACCTTT TCCCGACTGT CAGCATTCTC
GGATCCATCG GTTTCAGTGC CACCGACCTG GGTAGTTTCG GAGCCTCCGC CCTGGCGGGA
TCCTTGGGGC CTTCCATTCA CTGGCGTGCT TTCGACCTGG GTCGGGTGCG TGCGCAGATG
GCCCAGGCCG ATGCCAGATC CATAGCCGCG TTGGCTGCTT ACGAGAAAAC GGTGCTAAAG
GCGCTGGAGG AAACACAGAC GGCTCTGAGC AATTTTTCCC GGGAGGAAGA ACGCCGCGGA
ACATTGCAGC AAGCCGCACG TTCCGCACGG CACTCGGCAC AGCTCGCCAA GCAGCGTTAT
GAACAGGGGA TGGATGCTTT TCTGGACGTG TTGGATGCGG AACGCACCCA GTTGCAGACC
GAGGACGCCC TTGCCGCCAG CGAAACCACG GCGGCGTTGG ATTTAATCGC CATCTATAAA
GCCCTTGGCG GCGGGTGGCA GGTGGTGGAG TAA
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| Protein sequence | MKSITAIFLC TLVLSGCSVF RDYTPPENPV GAEQTDLTVS DAVRYKAAQE PVAAWWQKFD
DPQLVALVEE ALDTNLDVRI ALANLGEARA MAREVGLDRF PTVTGNAAYF RLLNSRETSA
GNSVERDVNS YTAGFDALWE LDLFGRVSQR IAAQKALTDA ALNDVRQIYV TVSAEAARTY
IELRGAQYRL NIAERNARNQ AGTYELTQKL FDGGRGTALD VSRAITQRDL ARSRIPPLQA
EVTAAINRLS VLTGRVPDAL LEALSGSKPL PSLPVTVAVG DAEGLLKRRP DIRTAERQLA
ASVARYNVAA TDLFPTVSIL GSIGFSATDL GSFGASALAG SLGPSIHWRA FDLGRVRAQM
AQADARSIAA LAAYEKTVLK ALEETQTALS NFSREEERRG TLQQAARSAR HSAQLAKQRY
EQGMDAFLDV LDAERTQLQT EDALAASETT AALDLIAIYK ALGGGWQVVE
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