Gene Pcar_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1073 
Symbol 
ID3723897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1259869 
End bp1260672 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID637750664 
Producthypothetical protein 
Protein accessionYP_356493 
Protein GI77918678 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.44354e-21 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATACCG TCGAAAAGCA ACCGTACCTG TTTGCCCGCC TCCACTGGCA CTGGCGACTG 
CAACGCTGGA AACGCACCTT GTCCCGCTAC GTTTCGGATC CGCGGGTGCC TTACAACCCG
GTGTGCGTTT CACGCCTGCT TATCGGCATC AACCTGCTGT GGTTCACCTG GATGATTCTG
CGCGCGCTGG TTGCCGGCCT CGGACTCGGC ACCGTACTCA ATCCGCCCAC CGGGCTGCTC
ATGTATTTCG GCGCTCAGCG CTGGAATCCC GAGGTTCTGG TTTTCCACCA GTGGTGGCGT
TGCCTGACGT ATGCCTATAC CCACGGCGGA CTGATGCATC TGGGGTTCAA CATGGTGGTG
CTCTACCAGG TCGGCCCCCT TATCGAAGAT CACATAGGCT CGGCACGCTT TTTCATCCTT
TACACCTTTA CCGCCCTGAC CGCCACCCTG CTGGGGTTGC TGTGGCATCC GCTGGTCCCG
GTGGTGGGCG CCTCGGGATC CCTGTTCGGA CTCATCGGTT TCGCCGTGGC CTATTTTCAC
CGCCTGGGCA ACCATGCCCA CACGGTGCGT AATTTCATGT TTCAGTGGGC AGCCATCGCC
TTTATATTCG GCCTGATCAT GGGCGCGGAC AATGCCGGAC ATCTCGGCGG CGCCATAGGC
GGAGCTGTTT TCGGTCTGCT GCTGCCCCTG GGCAAACGCG GGAACAAAAT AACATCCCAT
CTGTTCGGCG GGCTGTCCGT AATGGCGGCG GTCGTTACAC TGGCCTGCCT GCTGTTGCAG
CTTATCTTCC CCTATCCAAG CTGA
 
Protein sequence
MDTVEKQPYL FARLHWHWRL QRWKRTLSRY VSDPRVPYNP VCVSRLLIGI NLLWFTWMIL 
RALVAGLGLG TVLNPPTGLL MYFGAQRWNP EVLVFHQWWR CLTYAYTHGG LMHLGFNMVV
LYQVGPLIED HIGSARFFIL YTFTALTATL LGLLWHPLVP VVGASGSLFG LIGFAVAYFH
RLGNHAHTVR NFMFQWAAIA FIFGLIMGAD NAGHLGGAIG GAVFGLLLPL GKRGNKITSH
LFGGLSVMAA VVTLACLLLQ LIFPYPS