| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1048 |
|---|
| Symbol | mreC |
|---|
| ID | 3723911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1229624 |
|---|
| End bp | 1230442 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637750639 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_356468 |
|---|
| Protein GI | 77918653 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.00267532 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA TGCTCAGAAA ATACCGTACC CCGCTGCTGG TCATCTGCCT GCTCATGACC
GCCCTGCTGA TCTATTCTTC ACGTTTACGC AAACAACCCC AAACCACCCT CTTCGAAAAG
GCGATCCTGC AACTGGCCAG CCCGCTTCAA CGCGGCTTCA GCACGAGCAT GCGCTCCCTT
ACGGGGCTGT GGCAGCACTA TCTGTGGCTC ATCGATACGC AACGGCAAAA CGACCGGCTG
CTTGAAGAAA ACCGTCGCCT GCAGGGGCAA CTCGATCTGG TGCGGGAATT TCAACTTGAA
AACCAGCGCC TCAGCGCCTT GCTGTCGCTG CGTGAAAGGC TGACCATTCC GACTCTGCCA
GCCCGCGTCA TCGCCGAAGA TGCCACCAGT CTTTTCCAAA CCCTCATCAT CGACCGGGGG
ACGGAAGACG GATTACACGA GGGGTTGCCT GTCGTCGTCC CCGAAGGGGT GGTGGGACGC
ATTATCCGCT GCTCCGCCCG GCAGTCGCGG GTACTGCTCG CAACCGACGC ATCCTCGGCC
ATGGCCGTGC TGGTGCAACG CAGTCGAGCC CGGGGCATTT GCCGGGGGCG CGGCCAATCG
TTGACCCTCG ACTTCGCTCT GCTGCGTGAA GATATCGCTA CCGGAGACAC CATCATCACA
TCGGGCAATG GCGGCATTTT CCCCAAGGGA CTGCCCGTGG GAACCGTCAG CCATACCCAG
ACAAACGATC TGGACCTGTT CCAAACGGTC ACAGTGACCC CCGCCGTCAA CTTCTCCCGG
CTGGAAGAAG TTCTCGTCAT GCTGGACACC GTCCCATGA
|
|---|
| Protein sequence | MLEMLRKYRT PLLVICLLMT ALLIYSSRLR KQPQTTLFEK AILQLASPLQ RGFSTSMRSL
TGLWQHYLWL IDTQRQNDRL LEENRRLQGQ LDLVREFQLE NQRLSALLSL RERLTIPTLP
ARVIAEDATS LFQTLIIDRG TEDGLHEGLP VVVPEGVVGR IIRCSARQSR VLLATDASSA
MAVLVQRSRA RGICRGRGQS LTLDFALLRE DIATGDTIIT SGNGGIFPKG LPVGTVSHTQ
TNDLDLFQTV TVTPAVNFSR LEEVLVMLDT VP
|
|---|
| |