Gene Pcar_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1045 
SymbolmrdB 
ID3723947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1226160 
End bp1227257 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content56% 
IMG OID637750636 
Productrod shape-determining membrane protein; sensitivity to radiation and drugs 
Protein accessionYP_356465 
Protein GI77918650 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACC GTCGTCTTCT CACACACTTC GACTGGGGAC TTTTGTTGCT GGTGTTGATT 
ATTGCCGGGC TCGGTATCCT CAACCTGATA AGCGTCACCT CATCGTGGGC ATCGCCGGCC
GCGCCGTTTT CCCTCAAGCA GCTTTCATGG CTGGGAGGCG GACTGATTAT TGCGGTCAGT
ATCTGCGCCA TCGACTACCG CCGGCTCGAA TATCTGGCCT TTTACCTTTA CGCCGGCAAC
CTTTCACTGC TTCTGCTGGT ACTCGTCATC GGTCGCACCT CCATGGGCGC CACACGCTGG
CTGGATCTCA AATTTTTCAA CCTGCAACCC AGCGAACTGA TGAAAATCGT CATCATCATC
GCCCTGGCCT GCTTTTTCAG TCGACGGGAC TCGCCGCAGG GTTATACATT TCGGGAACTC
TGGGCCCCAT TCACCATGTT GGCGATGCCC GCGCTGCTTA TCATGAAACA GCCCGACCTC
GGCACCGCCA TGATCGTGCT GATGATCGGT GCTTCCATGG CCTTATTCGC CGGGATTCGA
CCGGCCACCC TGACGGGCCT GGGATTGCTG GCCGGCAGTG CCGCCACCGG CGGATGGTTT
TTGCTGCACG GCTACCAGAA ACAAAGAATT CTGACCTTTC TGAATCCGGA AGCCGATCCT
CTCGGATCGG GCTACCACAT CATTCAATCG AAAATTGCCG TCGGCAGCGG CGGCTTCTGG
GGCAAGGGCT TCATGAAAGG CACCCAGTCC CAGCTCTCTT TTCTGCCTGA GCGCCACACC
GACTTTGCGT TCTCCGTTTT TGCGGAGGAA TGGGGATTTA TCGGATGTCT GACTTTACTG
GCGCTGTTGC TGCTGCTGGT AATCTGGGGA CTCAACATTT CGCGCCACGC ATCAACGCGA
TTTGGCATGT TTCTGGCTTT TGGTGTTAGT GCCATGCTGT TTTTTCATAT CGTCATCAAC
CTCGGCATGG TTATCGGCCT GCTGCCGGTC GTCGGTGTCC CGCTGCCGCT TTTTTCCTAC
GGCGGCACCA GTATGATTAC GACTATGACG GGCGTGGGGC TGTTGCTCAA TGTCAGCATG
CGACGGTTCA AGTTTTAA
 
Protein sequence
MFDRRLLTHF DWGLLLLVLI IAGLGILNLI SVTSSWASPA APFSLKQLSW LGGGLIIAVS 
ICAIDYRRLE YLAFYLYAGN LSLLLLVLVI GRTSMGATRW LDLKFFNLQP SELMKIVIII
ALACFFSRRD SPQGYTFREL WAPFTMLAMP ALLIMKQPDL GTAMIVLMIG ASMALFAGIR
PATLTGLGLL AGSAATGGWF LLHGYQKQRI LTFLNPEADP LGSGYHIIQS KIAVGSGGFW
GKGFMKGTQS QLSFLPERHT DFAFSVFAEE WGFIGCLTLL ALLLLLVIWG LNISRHASTR
FGMFLAFGVS AMLFFHIVIN LGMVIGLLPV VGVPLPLFSY GGTSMITTMT GVGLLLNVSM
RRFKF