| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1042 |
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| Symbol | |
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| ID | 3723944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1220891 |
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| End bp | 1222288 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637750633 |
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| Product | two component signal transduction response regulator |
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| Protein accession | YP_356462 |
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| Protein GI | 77918647 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.472622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCT CAACCATCCT GGTTGTAGAT GACGAGCTTT TTTTTCGCCG TCTTTACGCC
AACCTCCTCA GCGAAAATGG TTATCAGGTG GAGACTGCCT CGTCAGGCGA GGATGCCGTC
ATCCGGCTTG CCCAAGGTGA TATCGATATC GTGCTTGCAG ATCTGGTCAT GCCTGGCATG
AGCGGGATGG GTATACTCGA TCACTGCCGC AAACTCCGCA ACCCCCCGGA TGTTGTTCTG
GTCACGGGAC ACGCCTCCGT CGAATCGGCC ATTCAGGCAC TTAAAAATGG GGCGCGCGAT
TACCTCATCA AACCTTTCGA TCCGACGGAA CTGCTGCATG TCGTCCACAC CTGCCTCGAA
CAACGCCATC TGCTCGACGA AAACTTTGTC CTCAAAGCTC AAATCCAGCT GCACCAACGC
GGGCAACACC TGGCGGCCCA GTTCGACCTC GATCAATTAT TCACCGAAGC GCTTGCCGCC
GTTCTGCAGG AAGCCGGCGG GGGGCGCGGC CTGGCCTGCC TGATCAACGA TGGTCAGATT
TCGCAACTGG CGAGCACCAA AGATCTGCAG GAAACCGAAG CGATGGCCCT CATGGATGCC
TTGCAGGATC ATCTCACCAA CGGCACCGAA CTGCGCATAT TGACCCGGAC GGAGCTGCCG
GAGGCCCCGC AACTTCCCGA GGGGTTACAT ACCATCGGCA TTTTCCCCTT GCGCTCGCCC
TACGGCCTGC ACGGCGCCAT GGTATTATGC AATCCGCTGG AAAAAGACTT TGACTCCGAC
CTGCCCCGCG AGAACCTGTG TTACCTGTTG GAGCAGACGG CCCTGGGATT CGAAAATGCC
TGCCGTTTTA AAAGCGCCCG GGATCTGATC TTCATCGATG ATTTGACCGG ATTGCACAAC
TATCGATACC TGCAGATGAT CCTGGAGCAG GAAATTCTGC GCGCCGAGCG TTACGGACTG
GAATTTTCCC TGGTCTTCAT CGACCTTGAT TTTTTCAAGC AGATCAACGA TACCCGCGGA
CACCTGGCCG GCAGCCAAGC CCTCAAGGAC GTCGCGGAAC TTTTGCGTCA ATGTGTCCGG
GACTCGGATG TCCTGTTCCG CTACGGCGGC GATGAGTTCA CCGGCTTTCT GGTGGAAACC
GGCTGCGAAG GCGCCGCCGT GGTCGCCGAA CGTATCCGCC GCTCCATTCA GGAACATGTA
TTTTTCCCGA CCAGCGACAA CCCTGCGAAA ATCACAGCCA CTGTCGGATA TGCGACCTAT
CCAACCGATG CCGGCACCAA GCAGGAGATT ATCCACCTGG CCGACAAGGC CATGTATGCC
GGCAAGCAAT GCCGTAACGC GGTACGCGGC GCCTGGCAAC TGGCGGAGAT GAAAGACGAG
CCGGCGGACG ACGCATAA
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| Protein sequence | MKSSTILVVD DELFFRRLYA NLLSENGYQV ETASSGEDAV IRLAQGDIDI VLADLVMPGM
SGMGILDHCR KLRNPPDVVL VTGHASVESA IQALKNGARD YLIKPFDPTE LLHVVHTCLE
QRHLLDENFV LKAQIQLHQR GQHLAAQFDL DQLFTEALAA VLQEAGGGRG LACLINDGQI
SQLASTKDLQ ETEAMALMDA LQDHLTNGTE LRILTRTELP EAPQLPEGLH TIGIFPLRSP
YGLHGAMVLC NPLEKDFDSD LPRENLCYLL EQTALGFENA CRFKSARDLI FIDDLTGLHN
YRYLQMILEQ EILRAERYGL EFSLVFIDLD FFKQINDTRG HLAGSQALKD VAELLRQCVR
DSDVLFRYGG DEFTGFLVET GCEGAAVVAE RIRRSIQEHV FFPTSDNPAK ITATVGYATY
PTDAGTKQEI IHLADKAMYA GKQCRNAVRG AWQLAEMKDE PADDA
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