Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1015 |
Symbol | |
ID | 3723956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1189947 |
End bp | 1191413 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637750607 |
Product | outer membrane protein |
Protein accession | YP_356436 |
Protein GI | 77918621 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1.22355e-16 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCATA GGGTCTGCTT TAGCCCAATC ATCCTGACCA CCTTTTTTTT AATTTTTTCG TCTCAGGGGA TAGGCGCCCC ATTAAAAACA ACGGGAAACA CTGTTAAATC CCCTGTTTCT CTGGAAAATT GCATTCAGAT GGCATTGAAA AACAATCATC GCCGTCCCGC CTCCCGGTAT GCGGTTGAAA TGGCCGAAGC CCAACATCGC CAGGCACTGG CCGGCTACTG GCCACAGGTC ACCGCCAAGG GGGGATTTAC GCGCATGGAT GAGCCGACCA ATTTCCTGTT TCCGGCCAAA AGTTTCAATG TTCCTGCGAC AACCGTCACG GTCGCCACCC CGATGGGCCC TATGCCCATA ACCACTCCGG CGCAGGAAAT GCAGATCCCC GAACAGGATG TCAAAATAAT GGATCGGGAT ACGTACTTTG CATCGGTCGA AGCGACTTGG TTGCTATACG ACGGCGGGAT GCGTAAAGGA TATCGCGAAC AGGCCAAGAG CCTTGTTGAC ATGATGAAAC AGGAGTCCCG ACGTACCGAC CTGGAGATCG TGGACAGTGT CACGCGACTT TATTACGGAG CGGTCCTGGC AGCACAATTG CACAGTATCG CTAAAGATAC CCTGGAGCGG ATGGAGGCGA CCCTCAATCT TACCGAAACC ATGTACAAAG AAGGCTCGGG CCGGGTGAAA AAAACCGACT TTCTCGGCAA CAAGGTAATG GTTGAATCGC TGCGCTCGAT GGTTGCCCTG CTGGAAAAAA ATGCCTTAAT AGCCCGTGCA GCTCTCGCCA ATACCATGGG TCTTCCCTGG AACGACAGCG TAACTCCGGC GGAAACGGCC ATGCCGTTCA CTCCCTTTCC CGACAATCTG GAACACCTGG TAAGCAGCGC CTACCGATTC AATCCCGACT GGGCAAAAAT CGAAGCAGGG ATATCCGCAG CGCAGGGAGC TATACGCACC GCCGTGAGCG AACATTATCC CAAGCTGGCG TTAACCGGCG AACTGCATAA ATGGTGGAAC GATTACAATA CGGGAGCGGT TACCGACGAA AATAAGGAGG GCTGGAGCGT CGGAATCGGC ATCGAAATTC CGATCTTCAG CGGCTTTTTA ACCCAGAACA AGGTATCGGA AGCCAAAGCC CGCCTGGCCA AAATCAAAGA GGAACAACTT CTTTTCAAAG AGGGGATCGG TCTACAGATT CGAGATACAT TCCTCTCCCT GAATGCCGCC GAAAAATCGT ATCAGGCAAC CCTCGAGGCC ATGAACGCAG CCGTAGAAAA TCGCGACCTG AATACCCGGG CTTATCGACA CGAGTTGGTG GAGACCGAAG ATGTCATTCG TGCCCAACTG ATGGAATCAT TTATGGCCGC ACAACATTAC AAGACGCGCT ACGACCATCT GGCTCTTCGG TCCCGGTTGA AACTGTTGGT AGGAACCGAA ATACAGCATA AACTGATCCG GCAATGA
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Protein sequence | MFHRVCFSPI ILTTFFLIFS SQGIGAPLKT TGNTVKSPVS LENCIQMALK NNHRRPASRY AVEMAEAQHR QALAGYWPQV TAKGGFTRMD EPTNFLFPAK SFNVPATTVT VATPMGPMPI TTPAQEMQIP EQDVKIMDRD TYFASVEATW LLYDGGMRKG YREQAKSLVD MMKQESRRTD LEIVDSVTRL YYGAVLAAQL HSIAKDTLER MEATLNLTET MYKEGSGRVK KTDFLGNKVM VESLRSMVAL LEKNALIARA ALANTMGLPW NDSVTPAETA MPFTPFPDNL EHLVSSAYRF NPDWAKIEAG ISAAQGAIRT AVSEHYPKLA LTGELHKWWN DYNTGAVTDE NKEGWSVGIG IEIPIFSGFL TQNKVSEAKA RLAKIKEEQL LFKEGIGLQI RDTFLSLNAA EKSYQATLEA MNAAVENRDL NTRAYRHELV ETEDVIRAQL MESFMAAQHY KTRYDHLALR SRLKLLVGTE IQHKLIRQ
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