Gene Pcar_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0957 
Symbol 
ID3724098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1127674 
End bp1129239 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content49% 
IMG OID637750548 
Producthypothetical protein 
Protein accessionYP_356380 
Protein GI77918565 
COG category 
COG ID 
TIGRFAM ID[TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA TTGAAGACGC TTGGTTGCCG GTTCTGCGGG AGCAGGGTCC GGATAAAATC 
GCTCCTTGGC AAATGGTTGA ACCGTACAAT CCCGTTTTGG AGATCATCGC TCCACGTCCC
GATTTCCAAG GTGCGCTCTA TCAGTTTCTG ATCGGTCTGT TGCAGACCTG TTTCACGCCG
GAAGATCACG ATGAGTGGCT GGAATATTGG GAAGAAATGC CGACGGTTGA AGAATTGAAA
AAAACTTTTG AAAAGGTGGC CTCTGCATTT GAGCTGGATA AGCCAGTCGA CTCGTCTTTT
TTACAGGACT TCGATTTGAA AGCTGGTGAG ATAAAAAACA TCGCGGGTTT GTTGATTGAA
TCTCCCGGTG GGAAAACGAT CAAAGACAAT CTCGACCATT TTGTTAAAGG TGGTGCGATT
AGAAGGGTTT GTCCCTCCTG TGTAGCCACG GCCTTGTTCA CCCTTCAAAT CAATGCGCCT
TCAGGCGGGG TTGGTCATCG GGTGGGACTG CGTGGTGGCG GGCCGCTGAC CACCTTGGTG
ATGCCTGGTG CTAAGGAATC CCTTTGGAAA AAGCTTTGGC TTAATGTTTT GGATAGAGAC
TGGTTTGAAA CGACCGACAT CGAACTGGGC CCGGGCATTT TTCCCTGGAT GGGACCGACG
CGCATCTCTG ACAAAGGCGG TAAGAACACA ACGCCGGAGG ATGTTGATTC TCTGCAGGTG
TACTGGGGGA TGCCGCGACG TATCCGTCTG GATTTTCTTG ATGCCGAAGA GAGCCGTTGT
GATTTATGTG GCGAAAACGC TACATCCTTT GTCGAAAAAT ATCGGACACA AAATTACGGG
ACGAATTATG AAGGTGCATG GGTACACCCG CTGACACCTT ACCGTTTCGA CCCTAAGAAG
GAAAAACCTC CTTTATCTTT GAAGGGGCAA CAAGGCGGCT TGGGGTATCG GCATTGGCTT
GGGGTGACCA TGACGGATCA GTCGTCCGGC GATTGCTCGG CAAAAGTTGT TAAAGCCTAT
ATGGAAGAAA GGGTTCACAG CTTGACGGGA GAATCGCTTG CCAGGCTGTG GTGCTTTGGC
TACGACATGG ACAACATGAA GGCACGTTGC TGGTATGACC ATGAAATGCC CCTTCTCAAA
CTTGATGCCG CGCAAAGGGA CAATCTGTTG CATTGGGTGA AGGAGTTGGT CGATGCCGCA
ACGGATGTTT CAGGATTTTT GCGAAGTCAG CTCAAAGAAG CCTGGTTTAA ACGAGCCAAA
GACGTTAAAG GCGACATGAA TGCTGTTGTG TTGGAATTTT GGCAACAGAG TGAGAACGAT
TTCTATGCCT TGTTGAAACG TTTTTCCGAT CTTCCCGGCG ACCAACGTCA AGTTCCCCCG
GAAATATACG CATTCTGGGC AAAAACCATT CGAAATCTGG CGCTCGACCT GTTTGATTCC
TGGGCGTTGG AATCTCCAGT CGAAGATGCT GATATGAAAC GGATTATCGG TGCCCGTAAA
GAGTTGGCAA AGAAACTGCG CACAAGTAAG GCAATGAAAA CTCTGCTCAA TAAATCTTCC
CTATAG
 
Protein sequence
MNLIEDAWLP VLREQGPDKI APWQMVEPYN PVLEIIAPRP DFQGALYQFL IGLLQTCFTP 
EDHDEWLEYW EEMPTVEELK KTFEKVASAF ELDKPVDSSF LQDFDLKAGE IKNIAGLLIE
SPGGKTIKDN LDHFVKGGAI RRVCPSCVAT ALFTLQINAP SGGVGHRVGL RGGGPLTTLV
MPGAKESLWK KLWLNVLDRD WFETTDIELG PGIFPWMGPT RISDKGGKNT TPEDVDSLQV
YWGMPRRIRL DFLDAEESRC DLCGENATSF VEKYRTQNYG TNYEGAWVHP LTPYRFDPKK
EKPPLSLKGQ QGGLGYRHWL GVTMTDQSSG DCSAKVVKAY MEERVHSLTG ESLARLWCFG
YDMDNMKARC WYDHEMPLLK LDAAQRDNLL HWVKELVDAA TDVSGFLRSQ LKEAWFKRAK
DVKGDMNAVV LEFWQQSEND FYALLKRFSD LPGDQRQVPP EIYAFWAKTI RNLALDLFDS
WALESPVEDA DMKRIIGARK ELAKKLRTSK AMKTLLNKSS L