Gene Pcar_0921 details

Gene Information

• Locus tag: Pcar_0921
• ID: 3724140
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1086879
• End bp: 1087496
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637750512
• Product: putative threonine efflux protein
• Protein accession: YP_356344
• Protein GI: 77918529
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 70
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCTTA GTGAATTGAT TACAGTTCTG GTTGTCGGTT GGTTCGTAGT GGTTACTCCC 
GGACCCAATA TGGCGATAGT TATTAAAAAC AGCATTTTTC ATTCTCGATC TCATGGGGTC 
TTTACTGCAG TCGGTCTCCT ACTGGGAAAC ATTGTCCATA TCTCATATTG TCTTGCTGGG 
ATTGGATTAC TAATAAGTCA GTCAATGTTT GCCTTTAATT TAATAAAATG GCTAGGTGCG 
GGCTACCTTG TTTATCTCGG TATCAGGGCC TTGAAATCGA ATAAACAGGA AATAGTTGAA 
AGAATTGATA TAGCATCAAG GGCCAATTAT TGGGTATCTA TGCGATCAGG GTTTTTCACA 
GACTTACTCA ATCCCAAAGC CACACTGTTT TACCTTGCCC TTTTCACCCA AATCATAAGG 
CCGGATACTC CTGCCTGGGC CCGGGTTACA TACGGCATAT CCATTGCTTT TCTGGAGTTC 
CTTTGCTTCG TGGTACTTTC AATGATTATT GGGCATAGTC TGGTTGTGAA ACGTTTTGAA 
AAAATTAGTC ATTTGATTGA ACGTTTTACT GGGCTGGTAT TGGTTGGTTT GGGTATTCGT 
GTTGCGTTTT CTGATTAA 

 

Protein sequence

MFLSELITVL VVGWFVVVTP GPNMAIVIKN SIFHSRSHGV FTAVGLLLGN IVHISYCLAG 
IGLLISQSMF AFNLIKWLGA GYLVYLGIRA LKSNKQEIVE RIDIASRANY WVSMRSGFFT 
DLLNPKATLF YLALFTQIIR PDTPAWARVT YGISIAFLEF LCFVVLSMII GHSLVVKRFE 
KISHLIERFT GLVLVGLGIR VAFSD