Gene Pcar_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0813 
Symbol 
ID3723094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp959890 
End bp960573 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content53% 
IMG OID637750407 
ProductAcrR/TetR family transcription regulator 
Protein accessionYP_356240 
Protein GI77918425 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones89 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC AGAGATCGGG TGAAACCAGG GAAAAGCTGC TGGCCGCGGC CAGTGTCGTG 
TTTATGGAAA AGGGCTTTCG CGATGCGACG GTGTCGGAGA TATGCAAGCG CGCTGGCGCC 
AATGTTTCCG CCGTGAGTTA TTATTTCGGC AGCAAGGAGG CTCTTTATCA GGAGACGTGG 
CGGCATTGCT TTACCGAATC CGTCAAGGCT CATCCGGTGG ACGGCGGGGT GAGTGCGGGT 
GCGCCTGCCA CCGAACGGTT GCGCGGGCAT GTAAAGGCCT TGGTGGGGCG GATTGCCGAC 
GAAGACAGTA GGGAATTCTT CATTTCCTGG ATGGAGATAG TTAATCCTAC CGGCCTTCTT 
CAGGAGATCA TGAAGGCCGA ATTTATTCCC CTGCGTGAAA AGACTTTGTC CTTGATGCGG 
GAGCTGCTCG GGCCGAACGC CAGCGAACAA CAGGTTGTTT ATTGTGAAAC CTGCCTTATC 
AGTATGTGTT TTCATCCAAT GCTGATAAAG AGGGTCAATC AGAGAACCAA AAACTTCGAA 
GGTCCCCATC CCGTTGAGGA TCTTGATGCC TTTATTGAAC ATGTGTTGAC CTTTACCCTG 
GCGGGGATTG CCGCCATCCG CAAGGATTTA CCCGTAGGTT CATCATCCCC TGAATCCGAC 
AACACGCCTG CGTCGAAGAT ATGA
 
Protein sequence
MAQQRSGETR EKLLAAASVV FMEKGFRDAT VSEICKRAGA NVSAVSYYFG SKEALYQETW 
RHCFTESVKA HPVDGGVSAG APATERLRGH VKALVGRIAD EDSREFFISW MEIVNPTGLL 
QEIMKAEFIP LREKTLSLMR ELLGPNASEQ QVVYCETCLI SMCFHPMLIK RVNQRTKNFE 
GPHPVEDLDA FIEHVLTFTL AGIAAIRKDL PVGSSSPESD NTPASKI