Gene Pcar_0784 details

Gene Information

• Locus tag: Pcar_0784
• ID: 3723102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 928223
• End bp: 928849
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637750379
• Product: amino acid efflux/transport protein
• Protein accession: YP_356213
• Protein GI: 77918398
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTATCTA CCGAAACGAT AATGACCTTT TTCAGCGTCT CTGTTTTACT GGGCCTTGCA 
CCAGGCCCTG ACAACATCTT TGTTCTGACG CAGTCTGCTT TGCGTGGAAA GGGGCCGGGA 
CTCATTGTTA TGCTCGGTTT GTGTACTGGG CTTATTGCAC ATACTATCGC TGTTTCCCTT 
GGAGTCGCTA TAATTTTTCA AACATCCATT CTTGCTTTTT CAGTTCTCAA ATTACTGGGT 
GCGGCTTATC TCGTTTATCT CGCGTGGCAA GCCTTTCGAG CCTCAGCAGA GACTATCCAG 
GGCGGGCCGG AAGGAATTGT CAGTTACCGG AAGTTGTATG CTCGTGGCAT CATCATGAAC 
ATCACAAATC CAAAAGTATC CATTTTTTTT CTGGCCTTTC TTCCACAATT TACCGAACCA 
ACCAAAGGTC CCGTAGCTGT CCAACTTGTT CTGCTTGGGG GATTATTCAT TCTAGCGACA 
ATACTGGTGT TCGGAGGCAT TGCGCTTCTT GCAGGTACCC TTGGTGGCTT GCTTAAGCGC 
TCGGACAGAA CTCAGAACAT CCTGAATAAA ATTGCCGGTA CTGTTTTTAT GGGCCTCGCA 
CTGAAACTTG CTACGATAAG GCAGTAA 

 

Protein sequence

MLSTETIMTF FSVSVLLGLA PGPDNIFVLT QSALRGKGPG LIVMLGLCTG LIAHTIAVSL 
GVAIIFQTSI LAFSVLKLLG AAYLVYLAWQ AFRASAETIQ GGPEGIVSYR KLYARGIIMN 
ITNPKVSIFF LAFLPQFTEP TKGPVAVQLV LLGGLFILAT ILVFGGIALL AGTLGGLLKR 
SDRTQNILNK IAGTVFMGLA LKLATIRQ