| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0769 |
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| Symbol | hemE |
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| ID | 3976402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 913009 |
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| End bp | 914040 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637750364 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_356198 |
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| Protein GI | 116878447 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000000649218 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCCTG AGGACTACGA TTTCATCAAT GCCTGTTATG GCCGACCGGT AACGCGCACC
CCGGTATGGT TGATGCGGCA GGCCGGTCGT TATCTGCCCC AATATCGCAA GATCCGGGAG
CGGGTAAAAT TTCTGGAATT ATGCAAAACG CCGGAACTGG CTGCCGAAGT GACTTTGCAG
CCCGTTGACG CCTTGGGCGT CGATGCCGCC ATACTGTTTT CCGATATTCT CATTCCTATC
GAAGCTATGG GGCAGAACCT GTTTTATCGG CCGGCCCCTG TGCTGGAGCC GCCGGTGCGC
ACTGCGGCGG ATGTGGAAGC GTTGCGCGTG CTGCAGCCGG AGCAGGATGT TCCCTTTGTG
CTGGAGACCA TCCGCCTGTT GCGGCGGGAG CTGGACGGTC GCGTTCCCCT GATCGGGTTT
GGCGGCGCGC CTTTCACCCT GGCCTGTTAT ATGGTGGAAG GCGCCGGCAG CCGGCATTTC
CTGGCCCTTA AACGTCTCAT GTATCAAGCC CCCGAGACCT ACGCCCGGCT GATGGACAAG
ATCACCGATA CCAGCATAGT CTACCTGCGG GCCCAGGCCG AGGCCGGTGC CCAGGCTCTG
CAGGTTTTCG ACAGCTGGGG AGGTATCCTT TCGCCTGCCG ATTACCAGCG TTACGTGTTG
CCTTACAGCC GTCGTCTGCT GTCTGCACTG GGGGATTTCG GGATTCCCCT GATCCACTTC
GTCAAAGGGG CCGGTGCCAT GCTCGATCTG GTTGCCATGG CCGGTGGACA GGTCGTGGGA
CTGGACTGGT GTACCTCTTT GAACCGTGCC AGGGATATCC TCGGCAACGG TATGGCGGTG
CAGGGCAATC TCGATCCATC GGTATTGCTG GGCGCGCAAG ATATCATTGA GCGCGAAGTG
CGGCGCATTC TGGATGAAAA TGCCGGACGC CCCGGCCACA TCTTTAATCT CGGTCACGGT
ATTCTGCCGG AGGTGCCACC GGAGAACGCC GCCTTTCTGG TCGATTGCGT ACACCGTTTG
ACCCAAAGCT GA
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| Protein sequence | MMPEDYDFIN ACYGRPVTRT PVWLMRQAGR YLPQYRKIRE RVKFLELCKT PELAAEVTLQ
PVDALGVDAA ILFSDILIPI EAMGQNLFYR PAPVLEPPVR TAADVEALRV LQPEQDVPFV
LETIRLLRRE LDGRVPLIGF GGAPFTLACY MVEGAGSRHF LALKRLMYQA PETYARLMDK
ITDTSIVYLR AQAEAGAQAL QVFDSWGGIL SPADYQRYVL PYSRRLLSAL GDFGIPLIHF
VKGAGAMLDL VAMAGGQVVG LDWCTSLNRA RDILGNGMAV QGNLDPSVLL GAQDIIEREV
RRILDENAGR PGHIFNLGHG ILPEVPPENA AFLVDCVHRL TQS
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