| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0728 |
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| Symbol | rpoA |
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| ID | 3722934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 866373 |
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| End bp | 867389 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637750319 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_356157 |
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| Protein GI | 77918342 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAAA ACTGGAGAGA ATTGATCAAG CCTAAACGCC TCCAGGTTGA TGCGGACTCC
TTGTCGGATA CTTACGGCAA GTTCATGGCT GAGCCGTTTG AGCGTGGGTT CGGCACCACT
TTGGGTAATT CGTTGCGGAG AGTTCTGCTG TCTTCCCTGC AGGGGGCTGC CATTACCTCC
GTAAGGATTA AAGGGGTGTT GCATGAATTT TCGAACATCC CCGGTGTGAC CGAGGACGTT
ACCGATATCA TACTGAACCT TAAAGGGGTG CTGCTCAAAC TGCACGGATC TGATAGTCGC
AACATTCGGA TCGTGAAAAA GGGTGCTGGC GTTATTACCG CCGCTGACAT TATCACGGAT
TCCCATGTGG ACGTGCTCAA TCCCGATCAT CATATTCTGA CCTGCGGAAA AGATGCGGAT
ATCGAGTTGG ATATGGTCGT AGCCATGGGC AAAGGATATG TTCCGGCTGA GCGCAACCGT
GATGATAAGG CGCCTGTTGG AACGATCCCC ATCGACTCGC TTTTTTCGCC TGTTAAAAAG
GTCAACTTTA CGGTAACAAA CGCGCGTGTC GGTCAAATTA CCGATTACGA CAAGCTCATT
CTCGAGGTAT TGACCGACGG TAGCGTGCGT CCCGATGACG GCGTTGCCTA TGCGGCGAAA
ATCCTCAAGG AGCAGTTGCA GATCTTCATC AATTTCGATG AGGAAACTGA GACTGTCGTT
GAGGAGGAGA GTGAAGAGAG CCGTAAGATC AATGAGAATC TGTATCGTTC CGTCGAAGAG
TTGGAGCTGT CCGTAAGAAG CGCTAATTGT CTGAAAAATG CCAATATTCA CCTTATCGGT
GACTTGGTGC AGCGGTCCGA AGCTGAAATG CTCAAGACTC AGAATTTCGG GCGGAAATCT
TTGAATGAGA TAAAGGATAT CCTGGCAGAA ATGGGTCTTT CTTTGGGAAT GATGCTCGAA
AACTTTCCCG ATCCTGAATA CCTTAAAATG ATTCAGGAAG GTAAGGAAGA CCTGTAG
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| Protein sequence | MYKNWRELIK PKRLQVDADS LSDTYGKFMA EPFERGFGTT LGNSLRRVLL SSLQGAAITS
VRIKGVLHEF SNIPGVTEDV TDIILNLKGV LLKLHGSDSR NIRIVKKGAG VITAADIITD
SHVDVLNPDH HILTCGKDAD IELDMVVAMG KGYVPAERNR DDKAPVGTIP IDSLFSPVKK
VNFTVTNARV GQITDYDKLI LEVLTDGSVR PDDGVAYAAK ILKEQLQIFI NFDEETETVV
EEESEESRKI NENLYRSVEE LELSVRSANC LKNANIHLIG DLVQRSEAEM LKTQNFGRKS
LNEIKDILAE MGLSLGMMLE NFPDPEYLKM IQEGKEDL
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