Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0719 |
Symbol | rpmD |
ID | 3723308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 861320 |
End bp | 861499 |
Gene Length | 180 bp |
Protein Length | 59 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637750310 |
Product | ribosomal protein L30 |
Protein accession | YP_356148 |
Protein GI | 77918333 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.545555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGAC AAATCAAAGT GACCCTGAAG AAGAGCGGCA TCGGTCGCAA AGAATATTTT ACGAAAGTTC TTAAAGGTCT TGGTCTCACC AAGCTCCATA AGACGGTGGT ACTCACCGAT ACGCCTGAGA TCAGAGGTAT GATCCGCAAG GTGTCCCACA TGGTTGTGGT CGAGGACTGA
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Protein sequence | MAGQIKVTLK KSGIGRKEYF TKVLKGLGLT KLHKTVVLTD TPEIRGMIRK VSHMVVVED
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