| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0718 |
|---|
| Symbol | rpsE |
|---|
| ID | 3723307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 860804 |
|---|
| End bp | 861295 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637750309 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_356147 |
|---|
| Protein GI | 77918332 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.160468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCGCA TCGATCCCAA TGAGTTGGAA TTGACGGACC GGGTTGTTCA CATCAACAGA
TGTGCCAAGG TCGTCAAAGG TGGACGGCGT TTCAGTTTTT CGGCGCTGGT TGTTGTCGGG
GATGGTCAGG GAATCGTCGG CTATGGACAT GGTAAAGCCA AAGAGGTTCC CGAAGCGATT
CGTAAGGGCG TGGAGCAGGC CAAGAAAAAC CTGATCCGTG TGCCTTTGAA AGATCGCTCC
ATTCCTTTTG ACGTTATCGG AAAATTCGGT GCAGGCCGGG TTCTGCTCAA GCCTGCATCT
GCAGGTACCG GTGTTATTGC CGGTGGTGCC GTTCGTGCTG TGCTGGAGGT CTCCGGGGTT
GGCGACATCC TGTCAAAGTG CATTGGTTCC AATAATCCGC ACAATGTCGT ACGTGCTACC
ATAGACGCAT TGTCTCGCCT CAAAAGTGCT GAGGAACTGC GGGCTTTGCG TGGCGCCGAT
ACCGAAGAAT AA
|
|---|
| Protein sequence | MLRIDPNELE LTDRVVHINR CAKVVKGGRR FSFSALVVVG DGQGIVGYGH GKAKEVPEAI
RKGVEQAKKN LIRVPLKDRS IPFDVIGKFG AGRVLLKPAS AGTGVIAGGA VRAVLEVSGV
GDILSKCIGS NNPHNVVRAT IDALSRLKSA EELRALRGAD TEE
|
|---|
| |