Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0672 |
Symbol | |
ID | 3724012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 814989 |
End bp | 815753 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637750258 |
Product | RsbU-like serine phosphatase, regulator of sigma subunit |
Protein accession | YP_356101 |
Protein GI | 77918286 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000000000100052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCCA GTTTTCATAC CAAGGCTGAT ATCGATCTGG CCAGTGAAGT GCAGCAGTTG CTCTTTCCCA AGGGCTCGCC GCATTGCAAC TGGTGCTGTA TCGGTACCAA GAATCGCATG GCGCGGGGCC TGGGCGGCGA TTATTTTGAT TTCATCGCTT TGCCGGACGG TTGTCTGGTG GTGTTTCTTG GGGATGTTAC CGGTCATGGT CTGCAGGCCT CGGTGGTCAT GGCCCTGCTT TACGGGTTTA TACATCGCGG CACCGCCGAA AATTGCAATC CCCGGGAGAT GGCATCGCGG GTCAACGAAT TTCTGTTTTC CTTTGCTCGT CGCTCCCGCC GGCTGGATCA TTTTTTTTCC ACGACCCTGT TTTACGGAGT CATCGACCCC GACACTTTGG AGATGCGCTA CATCAACAAC GGGCAGGGCA ATCCGCTGGT GCGCCGCGGC CATAAGATTG TGTCTCTGGA GGCGACAGGG CAGCCGTTGG GGTATTTCGA TCAGCCTGAA ATTGCCATGG CCCGTTTTCA GTTTCAGCAT GGCGATCGAT TTCTGCTGTA CACTGACGGA CTGGTTGAAG CCTTTAATCC CAAGGGGCAG GCTTTCGGTC TGCCCGGGTT GAAACGATTG CTGCGCCATG ACCACCGTGG TCATGGCGAA TTTCTCGAAG CATTGTTTCA GTCACTGGTG TCATTCGGTG CCCCTGATCC GCCACAGGAT GACTGCACCG CCATAACCAT CGATTTTAAG CGTCCTGCGG TTTAA
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Protein sequence | MTSSFHTKAD IDLASEVQQL LFPKGSPHCN WCCIGTKNRM ARGLGGDYFD FIALPDGCLV VFLGDVTGHG LQASVVMALL YGFIHRGTAE NCNPREMASR VNEFLFSFAR RSRRLDHFFS TTLFYGVIDP DTLEMRYINN GQGNPLVRRG HKIVSLEATG QPLGYFDQPE IAMARFQFQH GDRFLLYTDG LVEAFNPKGQ AFGLPGLKRL LRHDHRGHGE FLEALFQSLV SFGAPDPPQD DCTAITIDFK RPAV
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