Gene Pcar_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0672 
Symbol 
ID3724012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp814989 
End bp815753 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content55% 
IMG OID637750258 
ProductRsbU-like serine phosphatase, regulator of sigma subunit 
Protein accessionYP_356101 
Protein GI77918286 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000100052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCA GTTTTCATAC CAAGGCTGAT ATCGATCTGG CCAGTGAAGT GCAGCAGTTG 
CTCTTTCCCA AGGGCTCGCC GCATTGCAAC TGGTGCTGTA TCGGTACCAA GAATCGCATG
GCGCGGGGCC TGGGCGGCGA TTATTTTGAT TTCATCGCTT TGCCGGACGG TTGTCTGGTG
GTGTTTCTTG GGGATGTTAC CGGTCATGGT CTGCAGGCCT CGGTGGTCAT GGCCCTGCTT
TACGGGTTTA TACATCGCGG CACCGCCGAA AATTGCAATC CCCGGGAGAT GGCATCGCGG
GTCAACGAAT TTCTGTTTTC CTTTGCTCGT CGCTCCCGCC GGCTGGATCA TTTTTTTTCC
ACGACCCTGT TTTACGGAGT CATCGACCCC GACACTTTGG AGATGCGCTA CATCAACAAC
GGGCAGGGCA ATCCGCTGGT GCGCCGCGGC CATAAGATTG TGTCTCTGGA GGCGACAGGG
CAGCCGTTGG GGTATTTCGA TCAGCCTGAA ATTGCCATGG CCCGTTTTCA GTTTCAGCAT
GGCGATCGAT TTCTGCTGTA CACTGACGGA CTGGTTGAAG CCTTTAATCC CAAGGGGCAG
GCTTTCGGTC TGCCCGGGTT GAAACGATTG CTGCGCCATG ACCACCGTGG TCATGGCGAA
TTTCTCGAAG CATTGTTTCA GTCACTGGTG TCATTCGGTG CCCCTGATCC GCCACAGGAT
GACTGCACCG CCATAACCAT CGATTTTAAG CGTCCTGCGG TTTAA
 
Protein sequence
MTSSFHTKAD IDLASEVQQL LFPKGSPHCN WCCIGTKNRM ARGLGGDYFD FIALPDGCLV 
VFLGDVTGHG LQASVVMALL YGFIHRGTAE NCNPREMASR VNEFLFSFAR RSRRLDHFFS
TTLFYGVIDP DTLEMRYINN GQGNPLVRRG HKIVSLEATG QPLGYFDQPE IAMARFQFQH
GDRFLLYTDG LVEAFNPKGQ AFGLPGLKRL LRHDHRGHGE FLEALFQSLV SFGAPDPPQD
DCTAITIDFK RPAV