Gene Pcar_0648 details

Gene Information

• Locus tag: Pcar_0648
• ID: 3724025
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 783190
• End bp: 783642
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637750233
• Product: membrane protein implicated in regulation of membrane protease activity, NfeD-like
• Protein accession: YP_356077
• Protein GI: 77918262
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 0.24585
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGAAA TTTTGTGGTG GTACTGGGTG GTGTTCGGTC TGGTGTTGGT GGCTTTGGAG 
TTGGTAATCC CCTCCTTTAC CATTATCTGG TTCGGGCTCG GAGCCTGTTG CGTGGGGTTA 
CTGATGTTGC CTTTCCCGAC GCTGCCGTTG GCCGGGCAGT TGCTTCTTTG GGGCGGTTTT 
TCGACCTTGT GGACCGTTTT GTGGTTTCGC AGGTTCAAGC CGTATATGAC CGATCGTACC 
AAGGCCGGCA TGTCCAAGGA TGCCATTATC GGCGAAACCG GCATCGTGAT TCAGGCTGTG 
CAACCGCCCC ATGTCAAGGG GCGCATTCGT TTTGTCGTAC CCTTGCTGGG AGATGAAGAG 
TGGCCCTGCA TTTGCGATGA GGCACTCAAG GCCGGTGACG AAGCACGAGT ACTCGATATC 
GAGGGCCATG TGTTGCGCGT GGCAAGGAAG TAA 

 

Protein sequence

MTEILWWYWV VFGLVLVALE LVIPSFTIIW FGLGACCVGL LMLPFPTLPL AGQLLLWGGF 
STLWTVLWFR RFKPYMTDRT KAGMSKDAII GETGIVIQAV QPPHVKGRIR FVVPLLGDEE 
WPCICDEALK AGDEARVLDI EGHVLRVARK