| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0642 |
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| Symbol | |
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| ID | 3724057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 775053 |
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| End bp | 776462 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637750227 |
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| Product | exonuclease |
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| Protein accession | YP_356071 |
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| Protein GI | 77918256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.000258182 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA CCTTTCACGG CGCCGTTCAG ACGGTCACCG GCTCCCAGCA TTTACTGGAA
GTCAATGGCA AAAAAATCTT GCTCGACTGC GGCTTGTTTC AGGGCAAGAG AAAGGAATCG
TTCGAACGAA ATCGCAGCGA ATTTTGCCAA GGCAAAGAGA TCGATTGCCT GGTTCTCTCC
CACGCACACA TCGATCATTC CGGACGCATC CCCTGTTTCG TTAAGAACGG CTTTGCTGGC
GAAATCTTCT GCACCGCGGC AACACGAGAC CTATGCGAAG TCATGCTTAT GGACAGTGCA
TTTATCCAGG AGAAAGATGT AGAGTTTGTC AACCGCCGGC GCAAAAAAAA GGGCCAGCGT
CTTTTCGAAC CTCTCTACAC CAGAGCAGAC GTAACTAAGG CCATGAAACA GTTTGTAGGT
ATCGGCTACG AGCGGCGGCA CCGTCTCTTT CCCGGTGTCT ATGTCACTTT TGTTGATGCC
GGACATATGC TGGGCAGCGC TCACGTAATC CTCGACATCG ACGATCAAGA AACCGGCCGA
AACCGACGGC TCGTGTTCAG CGGCGATATA GGAAGACCGG GGATCCCCAT CATCCGCGAT
CCCGTGCCGA TCGGCGACGG TGCCGATATT CTCATCATGG AGAGCACCTA CGGCAACCGA
CTGCATCCTC CTTATCTTGA GTCTGAAGAG GAGCTGGAAC GCATCGTCAA TGAGACCGTC
ACTCGTGGTG GCTCGCTTTT GATCCCGGCC TTTGCCGTCG GTCGGACTCA ACAACTCGTC
TACGCTTTGC ACAAACTCCA CAACGCTGGG CGGATTCCCG ACCTGCCGAT CTTCGTCGAC
AGCCCATTAG CAACCCGGGT CACCGACATC TTCCGCCTTC ATCTGGAGGA TTTCGATGCC
GAGATCCGGG AATTTCTGCT AACGGACGAA GATAAAAACC CCTTTGGTTT CGGGCGTCTC
CAATACACCA AAACGGTGGA GGAGTCCAAA GCTCTCAACA GCCTCAAAAT CCCAGCGATA
ATTATTAGCG CCAGTGGCAT GCTGGAGGGG GGGCGCATCC TCCATCATCT TCGAAACCGT
ATCGGGAACT CCCGAAACAC CATCCTCCTG ACCGGTTGGC AGGCACCGAA TACTCTAGGC
CGATATATTG TAGAAAAGAA GCCGTCCGTT GGTATTTACG GTGAGGAATA CCAGGTGAAA
GCCAACGTGG AAATTTTTAC CGGCTTCTCT GGCCACGCTG ACCGGGACGG GCTCCTGGAA
TTTGTGCGGG TTATGGAAAA GAAGCCGGAG CACACGTTCA TAGTTCATGG CGAAGAGGAC
GCTTCCAGTA GTCTGCGGCA GGCCCTCCAA ACAGAGCTGG CCCTCGACAA CGTGGTAATT
CCGGAGCCCC TGCAATCATT CAACGTATGA
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| Protein sequence | MKITFHGAVQ TVTGSQHLLE VNGKKILLDC GLFQGKRKES FERNRSEFCQ GKEIDCLVLS
HAHIDHSGRI PCFVKNGFAG EIFCTAATRD LCEVMLMDSA FIQEKDVEFV NRRRKKKGQR
LFEPLYTRAD VTKAMKQFVG IGYERRHRLF PGVYVTFVDA GHMLGSAHVI LDIDDQETGR
NRRLVFSGDI GRPGIPIIRD PVPIGDGADI LIMESTYGNR LHPPYLESEE ELERIVNETV
TRGGSLLIPA FAVGRTQQLV YALHKLHNAG RIPDLPIFVD SPLATRVTDI FRLHLEDFDA
EIREFLLTDE DKNPFGFGRL QYTKTVEESK ALNSLKIPAI IISASGMLEG GRILHHLRNR
IGNSRNTILL TGWQAPNTLG RYIVEKKPSV GIYGEEYQVK ANVEIFTGFS GHADRDGLLE
FVRVMEKKPE HTFIVHGEED ASSSLRQALQ TELALDNVVI PEPLQSFNV
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