Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0592 |
Symbol | polA-1 |
ID | 3724085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 717655 |
End bp | 720330 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750177 |
Product | DNA polymerase I |
Protein accession | YP_356021 |
Protein GI | 77918206 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000108203 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC AGGCCCAGCG CATTTATCTT ATCGATGGTT CTTCCTACAT CTATCGGGCA TATTACGCCA TCCGCCAGCT GTCCAATTCC AAAGGGCTTG CGACCAATGC CGTGTACGGG TTTACCAACA TGTTGCTCAA GGTGGTGCGC GACGAGCAGC CCGATCACCT GGCGGTGATT TTCGATGCCA AGGGGCCGAC CTTTCGTAAG GAAATTTATC CCGAATACAA GGCCAACCGT TCTGCCATGC CTGAAGATCT GCGCCCGCAG ATCCCGGTTA TCAAGGAACT GGTGAAGGCT TTTAACATGC CGGCTCTGGA ACTTGAAGGT TACGAGGCGG ACGATATCAT CGCCACCCTG GCACGGCGCT TCGCCGAGCG GGGCATGGCG GTTACCGTGG TAACCGGCGA CAAGGATTTG ATGCAGGTTG TCAGCGAGCG GGTGCGGCTG CTCGATACCA TGAAAGATCA GGTCGTCGGT CTGGCTGAAG TGGCCGAGCG TTTTGGCGGT ACTCCCGATA AGGTGGTGGA GGTGCAGGCC CTGGCCGGCG ACAGTTCGGA CAATGTGCCG GGAGTGCCGG GAATCGGTGA AAAAACCGCG CGTACCCTGA TCGCGCAATT CGGCACGCTG GAAAATCTGC TGGCCAATAT CGATCAGGTG TCGGGTAAAA AGCGCCAGGA AAACCTGCGC CAGTTCGGTG AACAGGCCCG TTTGTCCAAA AAGCTGGTTA GCCTGGTGGA CGATCTTTCG CTTGACGTCG ATTACGACAA CTTTGACCTT AGCGAACCGA ACCACGAGGC TCTTACCCAT CTGTTCAAGG AACTGGAGTT TCACAAGTTG CTGCAGGAAT TCTCCAGCGA CGAGAGGGCC AGCGGCGAGC ATTACCAGAC GGTGGTTACG GAAGACCAGC TCGATGATCT GATTCATGCC TTGAAAAAGG CCGGCCGCTT CGCGTTCGAC ACGGAGACCA CCAGTCTTGT CGCCACGCGT GCCGACCTGG TCGGGATATC CTTTGCGATC AAGCCCGGTG AAGGCTGGTA TCTGCCGGTG GGGCACCGCT ATCTGGGGGT ACCGGAGCAA CTGGATCGGG CGTTGGTGAT CGATAAATTG CGACCGCTGA TGGCGGATAC GCAGTTGGCC AAAATCGCGC AGAACGCCAA GTACGACCTG CTGGTGTTGC GCCGTGCCGG GCTGGAAGTG GCGGGGTTGA GCTGCGATAC CATGCTGGCT TCCTATCTGG CCAACCCGGC GGCCAAATCC CACGGTCTCG ACACCCTGGC TTCGGAGCTG CTCGGCTATC GCACCATCGG TTACACCGAG GTGACGGGCA AGGGCAAAAA ACAGATCGGC TTCGAAGAAG TCGAGATCGA AAAGGCCACG GTTTATGCCA CCGAAGATGC CGACATCACC CTGCGGCTGG CCGATAAGCT GGAACCGCAG CTGGCGGAAA CGGGTCAGGG CGAATTGTTT CGAACAGTGG AACTGCCGCT GGTGACGGTA CTGAGCGATA TGGAGTGGCA AGGCGTGCGC ATCGATGCCG ACTTTCTCAA GGGATTGTCG GCGGATATGA AGACGCGACT GGCGACGCTG GAGGGGGAAA TTCACGAACT TTCCGGTCGG TCGTTCAACG TGGCGTCCCC CAAGCAGCTC GGCGAGGTGT TGTTCGAGCA CCTGAAGTTG CCGCGCGGTA AAAAGACCAA GACCGGCTGG TCTACCGATG TCGAAGTCCT GACCAACCTT GCTGAAGAAC ATCCGATCGC CGCCAGGGTG CTCGATTATC GCTCGGTGGC CAAGCTCAAA AGCACTTATT GCGATGCGCT ACCCAAGCTG ATTCATCCCG ATACCGGGCG GATCCATACC TCTTTCAATC AGGCGGTAAC GGCAACCGGA CGCCTTTCTT CGAGCGATCC GAATCTGCAG AATATACCCA TCCGTACAGA GGAGGGGCGC CGTATTCGCG AAGCCTTTGT GCCGGCCGAG GGAAATCTGC TGCTGGCGGC GGACTATTCC CAGGTGGAAT TACGGATTCT GGCACACATG GCTGACGAGC CGGCTCTCAA GGAGAGTTTC GCGCATGGCG AAGACATTCA TGCGCGCACC GCAAGCGAGA TCTTCGGTGT GTTTCTGGAG CTTGTCACGC CGGAAATGCG CCGCCAGGCC AAAACCATCA ATTTCGGTGT GCTTTACGGC ATGAGCGCCT TCGGCCTGGC CAAATCCCTC GGCATCGCGC GCAAGGAAGC CCAGACCTAT ATCGACAATT ATTTTGCCCG TTACCCCAAG GTGCTGGAAT TCATGGAGGC CAAAAAGGCC GAAGCGCGGG AAAAGCAATA TGTCACGACC CTTCTCGGAA GGCGTTGCGC CGTACCGGAG ATCGCCAGTA AAAACGGCGC GGTCCGCGGT TATGCCGAAC GCAATGCCAT CAACTATCCG ATTCAGGGCT CGGCGGCCGA CATCATCAAG GTGGCCATGC TGCGCATTCA CGAACGCCTG AAGGCCGAAA AACTGGAGAC CAAGATGGTG CTTCAGGTGC ATGACGAACT GGTGTTCGAT ATGCCTGCCG CAGAACAGGC CGCCGTGGAA AACCTGGTGC GGGAGCAGAT GGAACACGCC TTTGAGCTCG ATGTGCCGCT GTTGGTCGAT ATGGGCGTCG GGCGTAACTG GCGCGAGGCG CACTGA
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Protein sequence | MTDQAQRIYL IDGSSYIYRA YYAIRQLSNS KGLATNAVYG FTNMLLKVVR DEQPDHLAVI FDAKGPTFRK EIYPEYKANR SAMPEDLRPQ IPVIKELVKA FNMPALELEG YEADDIIATL ARRFAERGMA VTVVTGDKDL MQVVSERVRL LDTMKDQVVG LAEVAERFGG TPDKVVEVQA LAGDSSDNVP GVPGIGEKTA RTLIAQFGTL ENLLANIDQV SGKKRQENLR QFGEQARLSK KLVSLVDDLS LDVDYDNFDL SEPNHEALTH LFKELEFHKL LQEFSSDERA SGEHYQTVVT EDQLDDLIHA LKKAGRFAFD TETTSLVATR ADLVGISFAI KPGEGWYLPV GHRYLGVPEQ LDRALVIDKL RPLMADTQLA KIAQNAKYDL LVLRRAGLEV AGLSCDTMLA SYLANPAAKS HGLDTLASEL LGYRTIGYTE VTGKGKKQIG FEEVEIEKAT VYATEDADIT LRLADKLEPQ LAETGQGELF RTVELPLVTV LSDMEWQGVR IDADFLKGLS ADMKTRLATL EGEIHELSGR SFNVASPKQL GEVLFEHLKL PRGKKTKTGW STDVEVLTNL AEEHPIAARV LDYRSVAKLK STYCDALPKL IHPDTGRIHT SFNQAVTATG RLSSSDPNLQ NIPIRTEEGR RIREAFVPAE GNLLLAADYS QVELRILAHM ADEPALKESF AHGEDIHART ASEIFGVFLE LVTPEMRRQA KTINFGVLYG MSAFGLAKSL GIARKEAQTY IDNYFARYPK VLEFMEAKKA EAREKQYVTT LLGRRCAVPE IASKNGAVRG YAERNAINYP IQGSAADIIK VAMLRIHERL KAEKLETKMV LQVHDELVFD MPAAEQAAVE NLVREQMEHA FELDVPLLVD MGVGRNWREA H
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