| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0534 |
|---|
| Symbol | |
|---|
| ID | 3725863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 646060 |
|---|
| End bp | 647610 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637750120 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_355964 |
|---|
| Protein GI | 77918149 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGTT TCAAACCCTA CGACTACAAG CAAACCGTTA TGTTGCCGGT GGATTTCGAA
CAGCAGATCC TGCCCGGCAC CTTCGAGTAT TCCCTGCACT ACCTGGTCGA CAACGAACTC
GACCTGAGTA TTTTCAACAG TAAATTCAAC AACGACGAAG CCGGCCGTCC CGCCTACGAT
CCGGCCATTC TGCTGAAGAT CGTGCTGCTG GCCTATTCGC GCGGGGTTAC CAGCAGTCGC
AAAATCGAAG CGCTGTGCCG TGAAAATGTG ATCTTTATGG CCCTGTCCGC CGACAGCCGT
CCGCATTTCA CCACCATTGC CGACTTCATC TCCGGATCTG CCGAACAGAT TGCCGACCTG
TTTCATCAGG TGCTGATGGT CTGCGATGCC CTGGGGCTGA TTGGTCATGA GATGTTCGCC
GTCGACGGTT GCAAGATGCC ATCGAACGCC TCCAAGGAGT GGAGCGGTAC CCACGACGAT
TTGAAAAAGA AAGCCAAGAA GATCGACCGG GCCGTACGCT TTCTGCTCAA CAAGCACCGC
GAAGAAGATA AACAGGGGCC GCCCGATCCG ACCATGCGAC AGCGGGAGGA AAAGCAGAAA
GAGACTCTGA CCAAGGCCAG TCGTAAGATC AAGAAGTTCC TGACCGAAAA CAAAAAACGC
CAGGGTCGTC GCGGCAAGGA AGTGAAAAGC AACATCACCG ATAACGACAG CGCCAAGATG
AAGACCAGCC ACGGCGTGCT TCAGGGCTAC ACTGGCGTCG CCGCGGTCGA TGCCGAGCAT
CAGGTGGTGG TGCATGCCGA AGCCTTCGGT ACGGGACAGG AGCATGGGTT GCTCGAACCG
ATGCTTGAGG GCATCCGCAA GGCCTTCAAC GGTAACTATC ATAACTGTGG TGACGAGATT
CTTAGCGAAG CCAAAATCCT GGCCGATAGT GGTTTTCATA GCGGACAGAC TCTGGAGCAT
CTGGAAGAAG AAGGCATAGA CGGCTATATC GCCGATCCTG GTTTTCGCTC CCGCGATCCC
CGTTTCAAGA CCGCGTCACG TCACAAGCCC GAAGACACCA GAGCATCCAA GATCCACTCC
AAGAAACGCT TCAGCGTCAG CGACTTTCAG GTCGATATTG CCAACAAGAC CTGCGTCTGT
CCGGCCGGTA ACCCTCTGTG GCTCAAGTGC GCCAAAGCCA AGATCGGCGA GCGTTTATTC
ATGCAATTCA TGGGCTATCA GGCTGATTGT GATCGCTGTG CAAAGCGGAG CCAATGCTTG
CGAGACATCC GCCAAAAAGG AGCCCGCCAG GTCAACGTGC TGCTGGAGAC GCTATCGAGT
CCCAAGGTCG GGATTATCGA GCGGATGAAA CAGAAGATCG ATTCCGTGTT CGGTCGCCAC
ATTTACGGGC AACGCCTGGG TATCGTCGAA CCTGTCTTTG GCAATCTGCG CGAAACGCTT
GGGCTGCGAC GGTTTTCCCT GCGTGGTCGC ACCAAAGTCG ATGGGCAATG GAAATTGATG
ACGATGCTCC ACAATATCGG CAAGATTCAT CGGTATGGAT GGACTTTGTA G
|
|---|
| Protein sequence | MPRFKPYDYK QTVMLPVDFE QQILPGTFEY SLHYLVDNEL DLSIFNSKFN NDEAGRPAYD
PAILLKIVLL AYSRGVTSSR KIEALCRENV IFMALSADSR PHFTTIADFI SGSAEQIADL
FHQVLMVCDA LGLIGHEMFA VDGCKMPSNA SKEWSGTHDD LKKKAKKIDR AVRFLLNKHR
EEDKQGPPDP TMRQREEKQK ETLTKASRKI KKFLTENKKR QGRRGKEVKS NITDNDSAKM
KTSHGVLQGY TGVAAVDAEH QVVVHAEAFG TGQEHGLLEP MLEGIRKAFN GNYHNCGDEI
LSEAKILADS GFHSGQTLEH LEEEGIDGYI ADPGFRSRDP RFKTASRHKP EDTRASKIHS
KKRFSVSDFQ VDIANKTCVC PAGNPLWLKC AKAKIGERLF MQFMGYQADC DRCAKRSQCL
RDIRQKGARQ VNVLLETLSS PKVGIIERMK QKIDSVFGRH IYGQRLGIVE PVFGNLRETL
GLRRFSLRGR TKVDGQWKLM TMLHNIGKIH RYGWTL
|
|---|
| |