| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0498 |
|---|
| Symbol | |
|---|
| ID | 3725885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 606418 |
|---|
| End bp | 607773 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637750084 |
|---|
| Product | two component response regulator |
|---|
| Protein accession | YP_355928 |
|---|
| Protein GI | 77918113 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA AAAAACAGCG CCTGTTGTTG GTAGATGACG ACACCGATCT GTTGCGGCTA
TTGTCCATTC GCCTGCGCGG TGCCGGATAC GAGGTCAACA TCGCGGAAAG CGGCGAGGAA
GCCCTGGCCA AGATTCCGGC CGTGCGCCCC CATCTGGTGA TTACCGATCT ACGCATGGCG
GGCATGGATG GCATGGCGTT GTTCGACGCC ATTCGCACCC GCCAGGGTTC CTTGCCGGTT
ATCATTCTGA CGGCCCATGG CTCCATCCCC GATGCCGTCG AAGCGACCCG TCGGGGGGTG
TTCAGCTTTC TCACCAAGCC TTTGGACAGT AAGGCCCTGC TGGAGGAGAT TCAGCGTGCG
TTGCGCATAG CCGGCGGTTC CGCCGAACAG GAATCTTCGG AGGGGATGTC CTGGCGCAGC
GAAATCATTA CCAAAAGCCC GACGATGGAA GATCTGCTGG CCAAGGCGCG GCTGGCTGCC
GAGAGTGATG CCGCGGTTTT GATCCGCGGA GAGAGCGGCA CCGGCAAGGA ATTGATTGCG
CGTGCCATTC ATCGGGCCAG CGCCCGCGCC GACAAACCCT TTGTCGCCGT CAACTGCGGC
GCCATACCCG ATACGCTGCT CGAATCGGAA CTGTTCGGCC ATACCAAAGG GGCTTTTACC
GGTGCCATGA AGGATTACCC CGGTCTGTTC CGTTCCGCCG AAGGGGGCAC CCTGTTTCTC
GACGAAATCG GGGATATGCC TCTGCCGTTG CAGGTCAAGT TGTTGCGCGT CCTGCAGGAG
AAGCAGATGC GGCCGGTCGG CTCGGTCGCT ACCTGTGCCG TCGATGTGCG GATCATTTCC
GCCACGCATC GCCATCTCGA AGAGGAGATC AGTGCCGACC GGTTTCGCGA GGATCTTTAT
TATCGCCTCA ATGTCGTCTC CCTCGACTTG CCGAGCCTGG CCGAGCGACG TGAAGATATC
CCCTTGCTGG CCAACCATTT TTTGCAGAAA TTCGCCGCGC GGAGCGGTAA AAAAGTTACC
GGGTTTGCAC CCGAGGCCAT GGAAGCCCTG TTGTCGGCGT CCTGGCCGGG CAATGTGCGC
CAGCTGATCA ACGTGGTCGA GCAGGGATTG GCCCTGACCA CGACCTCCCT GATTTCGGCT
TCGCTGGTTG CGGATGCCAT TCACGAAAAT ATCGAAAGCA TTCCCCCCTT CAGCGAGGCG
CGACGCCAGT TCGAGCAGGA CTACCTGGTG CGCCTGATGC AGCTTACCCG TGGCAATGTC
GCCCATGCCG CGCGGCTGGC CGGCCGCAAC CGTACGGAAT TCTATAAATT GCTCGGTCGC
CACCACATCG TGCCGAGTCT GTTTAAAAAT GTCTAA
|
|---|
| Protein sequence | MEEKKQRLLL VDDDTDLLRL LSIRLRGAGY EVNIAESGEE ALAKIPAVRP HLVITDLRMA
GMDGMALFDA IRTRQGSLPV IILTAHGSIP DAVEATRRGV FSFLTKPLDS KALLEEIQRA
LRIAGGSAEQ ESSEGMSWRS EIITKSPTME DLLAKARLAA ESDAAVLIRG ESGTGKELIA
RAIHRASARA DKPFVAVNCG AIPDTLLESE LFGHTKGAFT GAMKDYPGLF RSAEGGTLFL
DEIGDMPLPL QVKLLRVLQE KQMRPVGSVA TCAVDVRIIS ATHRHLEEEI SADRFREDLY
YRLNVVSLDL PSLAERREDI PLLANHFLQK FAARSGKKVT GFAPEAMEAL LSASWPGNVR
QLINVVEQGL ALTTTSLISA SLVADAIHEN IESIPPFSEA RRQFEQDYLV RLMQLTRGNV
AHAARLAGRN RTEFYKLLGR HHIVPSLFKN V
|
|---|
| |