Gene Pcar_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0431 
Symboluup 
ID3723144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp525479 
End bp527404 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content61% 
IMG OID637750017 
Productputative ATP-binding component of a transport system 
Protein accessionYP_355861 
Protein GI77918046 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.59167e-10 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAT CAGGAAGAGA GATCATTACC AAAATGGCTT TGTTGAGTTT ACAGAATGTC 
AGCCTGGCTT TTGGCGGCCC GGCGTTGTTC GAAGATGTCA GCCTGCATGT AGAGCGCGGC
GATCGCGTCG GATTGCTGGG GCGTAACGGA TGCGGCAAAT CGACCTTGTT GCGCCTCATT
GCGGGTGAAT TGAAACCGGA TAGCGGTGCC GTGGTGTGCC GCCAGGGGGT ACGGATCGCC
AGCCTGCCGC AGGATGTGCC CGCGGATCTG ACCGGCACCG TTTACGAGGA AGTTCTATGT
GGGCTCGGGC CGGTTGGGCA GGACCTTCTG CGCTACCATC GCCTTGCCCG GCTGGTTCGG
GACGGCGACG AAAGTCGGTT GCAGGCATTG CTCGAGAGTC AGCAGTCTCT GGAGGCGTCC
GGGGGATGGC CGCTGGAGCA GTTGGTGGGG CAGGTTCTGT CTCACCTGCA TCTGGATGGC
GATGTGCCGG TGTGCGATCT TTCCGGCGGC GTCAAGCGCC GGGTGCTGCT GGCCCGCGCC
CTGGTCGGCG AGCCTGATGT GCTGTTGCTG GACGAGCCGA CCAACCATCT CGATATCGAT
ACCATCGATT GGCTGGAAAG TTTCTTGTTG CGTTCGTCGC TGACCTTGCT GTTCGTTACC
CATGACCGCG AGTTTCTCAA AGCTCTGGCG ACCCGCACGG TTGAACTCGA TCGTGGTCAT
CTGTTCGATT TTGCCTGCGA TTATCCTACC TTTTTGCGCC GGCGGGAGGA GACGCTGCAT
GCCGAGGAGC AGCAGTGGCA GCGCTTCGAC CGCAAACTGG CCCAGGAGGA AGTCTGGATA
CGCCAGGGCA TCAAGGCGCG CCGCACCCGC AATATGGGGC GTGTGCGCGA GTTGCAGCGC
ATGCGTGAAG AACGTCTGCA ACGCCGCAAC CGGACCGGCA AGTCCCGCCT GCAACTGCAG
GAGGCCAGCC GTAGCGGTAA ACTGGTGGCG GAACTGGAGG GAGTCTGTTT CGGCTATGGC
GACAAACCGG TGGTCAAGGA TCTGACCACC ACCATCATGC GCGGCGACCG GGTCGGTATT
ATCGGGCCGA ACGGGGTCGG CAAATCGACT CTGCTCAAGC TGATTCTCGG TCAGCTGGCG
CCGCAGCAGG GGCAACTGCG TCTCGGCACC AATCTCGAAG TGCTCTACTT CGATCAGTTG
CGCGAGCAAC TCGATCCGGA TGCCACCGTG CAGCAGAACT TGTCCGGCGA CCAGGACACG
GTGCTGGTGG GTGGCACCCC GCGGCATGTT TACGGGTATC TGCAGGATTT TCTGTTCACC
CCGGATCGGG CCCGTACGCC GGTGCGCATT CTGTCCGGCG GAGAGCGTCA TCGCCTGCTG
CTGGCCAAGT TATTCACCCG GGAAGCCAAT GTTCTGGTGT TGGATGAACC GACCAACGAT
CTGGATCTGG AGACCCTGGA GCTGCTGGAA GAGTTGCTGG CCGAATTCTC CGGCACGGTG
TTGCTGGTCA GCCATGACCG GGCGTTTCTC GACCGGGTGG TGACGGGTAC CCTGGTGTAC
GAGGGCGAGG GCCGTTTTGT CGACTATGTC GGCGGCTACC AGGACTGGCT GCGGCAGCGG
CCTGTGCCGG AACCGGAACC GGAACCGGTG GCGGCCAAGC CGGCCAAGCC GGCCAAAAGT
AAGCCGGAGC GTTCACGGCC GCGCAAATTG AGTTTCAAGG AGCGACGCGA GCTTGAGGGA
TTGCCGTTGC GCATCGAGGC GTTGGAGACC GAGCAGGCCG ATCTGCACGA GAAGCTGGCG
GATCCTGCTT TTTACAAGGA GCAGGGCGAT GCTGTGTCCG CGGTGCGCGA TCGTATGACG
TGTCTTGAGG AGGAGTTGGC GGAGTGTTTT GTGCGTTGGG AGGAATTGGA GGCGTTGGCG
GAGTAA
 
Protein sequence
MKQSGREIIT KMALLSLQNV SLAFGGPALF EDVSLHVERG DRVGLLGRNG CGKSTLLRLI 
AGELKPDSGA VVCRQGVRIA SLPQDVPADL TGTVYEEVLC GLGPVGQDLL RYHRLARLVR
DGDESRLQAL LESQQSLEAS GGWPLEQLVG QVLSHLHLDG DVPVCDLSGG VKRRVLLARA
LVGEPDVLLL DEPTNHLDID TIDWLESFLL RSSLTLLFVT HDREFLKALA TRTVELDRGH
LFDFACDYPT FLRRREETLH AEEQQWQRFD RKLAQEEVWI RQGIKARRTR NMGRVRELQR
MREERLQRRN RTGKSRLQLQ EASRSGKLVA ELEGVCFGYG DKPVVKDLTT TIMRGDRVGI
IGPNGVGKST LLKLILGQLA PQQGQLRLGT NLEVLYFDQL REQLDPDATV QQNLSGDQDT
VLVGGTPRHV YGYLQDFLFT PDRARTPVRI LSGGERHRLL LAKLFTREAN VLVLDEPTND
LDLETLELLE ELLAEFSGTV LLVSHDRAFL DRVVTGTLVY EGEGRFVDYV GGYQDWLRQR
PVPEPEPEPV AAKPAKPAKS KPERSRPRKL SFKERRELEG LPLRIEALET EQADLHEKLA
DPAFYKEQGD AVSAVRDRMT CLEEELAECF VRWEELEALA E