Gene Pcar_0327 details

Gene Information

• Locus tag: Pcar_0327
• ID: 3725917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 410113
• End bp: 410592
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637749910
• Product: putative deaminase
• Protein accession: YP_355757
• Protein GI: 77917942
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1.69995e-17
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAGG CCCTGGTAGA GGCCTCAGCC GCCGCAAGGT TGGGTGAGGT TCCTGTCGGG 
GCTGTTGTCG TTAAAGACGG CATGATTATC GGCCGGGGTC ACAACCTGCG GGAAACCAGT 
AACGATCCCA CGACCCATGC CGAGATGATT GCTATCCGGC AGGCTGCTGC CGCCATCGAT 
TCCTGGCGGC TGATCGGTTG CACGCTGTAT GTGACGCTGG AACCCTGCGT CATGTGCATG 
GGGGCTATTA TCCTGGCCCG AATCCCGCGA CTTGTTTTCG GCAGTCGTGA TCCGCGTGTC 
GGAGCTGTGG GCTCCATTTT CGATCTGTCC CGGGACGAGC GTTTCAACCA TCAGGTGGCG 
GTCACCGAAG GTGTTCTTGC CCTGGAAAGC AGCGATATGC TCAGCGGTTT TTTTCGGCAG 
TTACGGGCCG AGAAAAAAAG CCGCAAGCGC AAGGCTGCCG ATAGCGAAGA TCAAACATAG 

 

Protein sequence

MQEALVEASA AARLGEVPVG AVVVKDGMII GRGHNLRETS NDPTTHAEMI AIRQAAAAID 
SWRLIGCTLY VTLEPCVMCM GAIILARIPR LVFGSRDPRV GAVGSIFDLS RDERFNHQVA 
VTEGVLALES SDMLSGFFRQ LRAEKKSRKR KAADSEDQT